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Os03g0227400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase, family 17 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.55 (0.0288) R2 : 0.795
β1 : -1.92 (0.105) R2dD : 0.156 R2D : 0.0835
β2 : 2.7 (0.074) R2dC : 0.602 R2C : 0.556
β3 : -0.932 (0.106) R2dE : 0.0364 R2E : -0.00684
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.88 (0.0626) R2dN8 : 0.125 R2N8 : 0.0136
σ : 0.535
deviance : 132.05
__
_____
C
peak time of C : 7.22
E
wheather : humidity
threshold : 73.88
memory length : 2699
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
131.32 0.538 9.54 -1.91 2.69 -0.919 0.525 -0.135 -0.874 7.22 74 2706 -- --
131.32 0.534 9.55 -1.93 2.69 -0.934 0.522 -- -0.879 7.22 73.87 2699 -- --
132.05 0.535 9.54 -1.89 2.69 -0.929 -- -0.0596 -0.878 7.22 74.19 2692 -- --
132.05 0.535 9.55 -1.92 2.7 -0.932 -- -- -0.88 7.22 73.88 2699 -- --
511.28 1.05 9.6 -1.88 -- -1.02 -- -0.0129 -0.92 -- 72 2822 -- --
152.71 0.579 9.52 -1.84 2.7 -- 0.488 -- -0.763 7.04 -- -- -- --
153.33 0.58 9.52 -1.83 2.7 -- -- -- -0.765 7.04 -- -- -- --
510.72 1.05 9.61 -1.87 -- -0.997 -- -- -0.854 -- 72.77 2821 -- --
196.61 0.653 9.5 -- 2.69 -1.76 -- -- -0.682 7.07 71.94 47520 -- --
538.37 1.08 9.58 -1.77 -- -- -- -- -0.715 -- -- -- -- --
241.38 0.727 9.48 -- 2.68 -- -- -- -0.561 7.08 -- -- -- --
560.99 1.1 9.52 -- -- -1.54 -- -- -0.446 -- 64.4 47520 -- --
621.4 1.16 9.54 -- -- -- -- -- -0.519 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 130.24 humidity 90.0 720 < th dose dependent rect. 19 2
2 130.26 humidity 80.0 720 < th dose independent rect. 19 1
5 131.63 precipitation 0.1 720 < th dose independent rect. 19 18
6 131.63 precipitation 0.1 720 < th dose dependent rect. 19 18
7 131.88 humidity 90.0 720 < th dose independent rect. 19 3
8 132.21 precipitation 0.1 720 < th dose independent rect. 19 10
9 132.21 precipitation 0.1 720 < th dose dependent rect. 19 10
10 132.31 precipitation 0.1 270 < th dose independent rect. 17 13
11 132.31 precipitation 0.1 270 < th dose dependent rect. 17 13
12 132.54 wind 9.0 270 < th dose independent rect. 6 11
16 132.84 humidity 70.0 270 > th dose dependent rect. 22 3
19 133.02 precipitation 0.1 720 < th dose independent rect. 1 6
20 133.02 precipitation 0.1 720 < th dose dependent rect. 1 6
21 133.03 radiation 1.0 30 < th dose independent rect. 22 19
23 133.13 humidity 60.0 4320 > th dose independent rect. 13 1
25 133.19 atmosphere 1005.0 10 > th dose dependent rect. 4 5
29 133.31 humidity 80.0 270 > th dose independent rect. 22 3
31 133.41 wind 7.0 270 < th dose dependent rect. 22 3
35 133.52 radiation 1.0 30 < th dose dependent rect. 22 19
36 133.58 humidity 80.0 270 > th dose independent rect. 21 5
38 133.64 precipitation 0.1 720 < th dose independent rect. 1 14
39 133.64 temperature 15.0 30 > th dose dependent rect. 4 5
40 133.64 precipitation 0.1 720 < th dose dependent rect. 1 14
43 133.77 radiation 20.0 270 < th dose independent rect. 17 14
44 133.80 precipitation 0.1 270 < th dose independent rect. 1 21
46 133.80 precipitation 0.1 270 < th dose dependent rect. 1 21
47 133.82 temperature 10.0 270 > th dose dependent rect. 22 3
49 133.91 wind 5.0 270 < th dose independent rect. 22 3
50 133.95 wind 1.0 43200 > th dose dependent rect. 5 1
51 133.96 radiation 40.0 270 < th dose dependent rect. 17 14
52 133.97 temperature 10.0 270 > th dose independent rect. 6 11
53 133.97 atmosphere 1015.0 270 < th dose independent rect. 6 11
54 133.97 temperature 10.0 270 > th dose independent rect. 17 13
61 134.13 temperature 10.0 30 > th dose dependent rect. 22 6
62 134.14 humidity 70.0 14400 < th dose independent rect. 18 1
75 134.34 wind 9.0 43200 < th dose dependent rect. 5 1
76 134.39 wind 9.0 270 < th dose independent rect. 17 13
79 134.40 humidity 60.0 270 > th dose dependent rect. 21 5
80 134.46 humidity 60.0 14400 < th dose independent rect. 16 1
81 134.47 humidity 70.0 14400 < th dose dependent rect. 16 1
82 134.48 radiation 1.0 30 < th dose dependent rect. 22 21
83 134.49 wind 3.0 43200 < th dose independent rect. 5 1
88 134.56 atmosphere 1000.0 270 > th dose independent rect. 22 3
89 134.57 wind 3.0 43200 > th dose independent rect. 5 1
95 134.69 humidity 60.0 14400 > th dose independent rect. 16 3
97 134.71 humidity 60.0 14400 > th dose independent rect. 16 13
98 134.72 precipitation 0.1 270 < th dose independent rect. 6 11
100 134.72 precipitation 0.1 270 < th dose dependent rect. 6 11
108 134.77 humidity 60.0 14400 > th dose independent rect. 16 8
113 134.84 humidity 70.0 4320 < th dose independent rect. 11 1
114 134.84 humidity 60.0 30 > th dose dependent rect. 22 6
118 134.93 precipitation 0.1 720 < th dose independent rect. 3 10
120 134.93 humidity 70.0 14400 < th dose independent rect. 18 14
122 134.93 precipitation 0.1 720 < th dose dependent rect. 3 10
128 134.97 wind 3.0 43200 < th dose dependent rect. 1 5
130 135.01 radiation 1.0 30 < th dose independent rect. 22 16
135 135.07 wind 5.0 43200 < th dose dependent rect. 23 7
138 135.12 humidity 70.0 14400 < th dose dependent rect. 16 3
169 135.19 humidity 80.0 30 > th dose independent rect. 22 6
172 135.21 humidity 50.0 270 > th dose independent rect. 17 14
173 135.21 temperature 15.0 270 > th dose dependent rect. 3 3
177 135.25 atmosphere 1005.0 30 > th dose independent rect. 4 5
181 135.32 radiation 1.0 30 < th dose independent rect. 22 14
200 135.34 temperature 15.0 270 > th dose independent rect. 22 3
201 135.34 wind 5.0 43200 < th dose dependent rect. 4 3
219 135.41 radiation 1.0 30 < th dose independent rect. 22 10
231 135.42 temperature 15.0 270 > th dose dependent rect. 2 5
239 135.44 temperature 30.0 270 < th dose independent rect. 22 3
240 135.44 humidity 50.0 270 > th dose independent rect. 22 3
244 135.44 radiation 1.0 270 < th dose independent rect. 22 3
249 135.44 precipitation 0.1 270 < th dose independent rect. 22 3
250 135.44 temperature 10.0 270 > th dose independent rect. 1 21
251 135.44 radiation 1.0 270 < th dose dependent rect. 22 3
256 135.44 precipitation 0.1 270 < th dose dependent rect. 22 3
258 135.47 precipitation 0.1 270 < th dose independent rect. 2 19
260 135.47 precipitation 0.1 270 < th dose dependent rect. 2 19
269 135.55 wind 3.0 30 < th dose independent rect. 22 6
271 135.56 wind 9.0 30 < th dose dependent rect. 22 6
277 135.58 radiation 1.0 30 < th dose independent rect. 22 21
285 135.60 wind 1.0 43200 > th dose dependent rect. 23 8
302 135.65 humidity 60.0 14400 < th dose independent sin 13 NA
309 135.67 atmosphere 1000.0 30 > th dose independent rect. 22 6
313 135.68 humidity 60.0 1440 > th dose dependent rect. 18 20
319 135.72 wind 1.0 43200 > th dose dependent rect. 4 3
332 135.75 humidity 60.0 14400 > th dose independent sin 13 NA
335 135.75 temperature 15.0 90 > th dose independent rect. 4 18
339 135.76 radiation 1.0 30 < th dose dependent rect. 22 16
344 135.78 atmosphere 1005.0 270 > th dose dependent rect. 4 1
345 135.78 humidity 60.0 1440 > th dose dependent rect. 11 2
353 135.82 humidity 70.0 1440 < th dose independent rect. 16 1
357 135.83 wind 9.0 270 < th dose dependent rect. 21 5
362 135.86 atmosphere 995.0 270 > th dose independent rect. 17 14
383 135.98 wind 5.0 270 < th dose independent rect. 21 5
429 136.04 humidity 70.0 14400 < th dose dependent sin 13 NA
438 136.07 humidity 70.0 1440 > th dose independent sin 16 NA
440 136.07 wind 9.0 30 < th dose dependent rect. 4 5
442 136.08 radiation 1.0 30 < th dose dependent rect. 22 14
445 136.08 radiation 40.0 30 < th dose dependent rect. 9 19
469 136.12 humidity 70.0 1440 < th dose independent rect. 11 9
490 136.13 humidity 70.0 1440 > th dose independent rect. 11 18
495 136.14 humidity 70.0 1440 > th dose independent rect. 11 9
521 136.16 precipitation 0.1 720 < th dose independent rect. 10 21
525 136.16 precipitation 0.1 720 < th dose dependent rect. 10 21
528 136.17 radiation 1.0 30 < th dose dependent rect. 22 10
541 136.20 humidity 70.0 1440 > th dose independent rect. 11 22
569 136.24 wind 3.0 43200 < th dose independent rect. 1 6
570 136.24 temperature 15.0 30 > th dose independent rect. 22 6
610 136.30 humidity 70.0 1440 < th dose independent sin 17 NA
616 136.31 atmosphere 1015.0 270 < th dose independent rect. 22 3
626 136.33 wind 3.0 30 < th dose independent rect. 4 5
632 136.34 wind 3.0 43200 > th dose independent rect. 1 6
649 136.35 temperature 15.0 270 > th dose independent rect. 2 19
656 136.36 atmosphere 995.0 270 > th dose independent rect. 7 10
658 136.37 radiation 40.0 1440 > th dose independent rect. 14 1
663 136.38 humidity 70.0 1440 > th dose independent rect. 15 14
667 136.39 precipitation 0.1 30 < th dose independent rect. 19 14
670 136.39 precipitation 0.1 30 < th dose dependent rect. 19 14
672 136.40 humidity 70.0 1440 > th dose independent rect. 15 5
679 136.41 temperature 30.0 30 < th dose independent rect. 22 6
680 136.41 humidity 50.0 30 > th dose independent rect. 22 6
684 136.41 radiation 1.0 30 < th dose independent rect. 22 6
692 136.41 atmosphere 1015.0 30 < th dose independent rect. 4 18
693 136.41 radiation 1.0 30 < th dose dependent rect. 22 6
700 136.42 wind 9.0 30 < th dose independent rect. 22 6
705 136.43 precipitation 0.1 270 < th dose independent rect. 3 3
710 136.43 precipitation 0.1 270 < th dose dependent rect. 3 3
723 136.45 radiation 40.0 90 < th dose independent rect. 9 19
733 136.47 radiation 30.0 30 < th dose independent rect. 4 5
755 136.50 precipitation 0.1 30 < th dose independent rect. 4 5
758 136.50 precipitation 0.1 30 < th dose dependent rect. 4 5
782 136.54 humidity 70.0 30 > th dose independent rect. 4 5
787 136.54 humidity 70.0 1440 > th dose independent rect. 15 18
794 136.55 wind 9.0 30 < th dose independent rect. 9 19
796 136.55 atmosphere 995.0 270 > th dose dependent rect. 22 3
823 136.59 radiation 1.0 30 > th dose dependent rect. 5 2
835 136.60 radiation 1.0 30 > th dose independent rect. 5 4
854 136.62 precipitation 0.1 30 < th dose independent rect. 4 18
857 136.62 precipitation 0.1 30 < th dose dependent rect. 4 18
861 136.64 temperature 20.0 30 > th dose independent rect. 4 5
863 136.64 humidity 50.0 30 > th dose dependent rect. 9 19
872 136.67 precipitation 0.1 720 < th dose independent rect. 19 1
875 136.67 humidity 70.0 1440 > th dose independent rect. 15 22
876 136.67 precipitation 0.1 720 < th dose dependent rect. 19 1
881 136.68 humidity 70.0 14400 > th dose independent rect. 18 14
883 136.68 radiation 1.0 720 < th dose dependent rect. 19 10
889 136.69 humidity 70.0 1440 < th dose independent rect. 15 5
916 136.69 humidity 60.0 1440 > th dose dependent rect. 1 23
936 136.72 humidity 60.0 4320 < th dose independent rect. 13 1
940 136.72 temperature 10.0 30 > th dose independent rect. 4 5
942 136.72 temperature 30.0 30 < th dose independent rect. 4 5
943 136.72 humidity 50.0 30 > th dose independent rect. 4 5
945 136.72 atmosphere 995.0 30 > th dose independent rect. 4 5
946 136.72 atmosphere 1015.0 30 < th dose independent rect. 4 5
948 136.72 temperature 10.0 30 > th dose independent rect. 9 19
952 136.72 humidity 60.0 1440 > th dose dependent rect. 22 23
966 136.74 humidity 60.0 1440 > th dose dependent rect. 10 23
971 136.75 humidity 60.0 1440 > th dose dependent no NA NA
986 136.77 radiation 1.0 720 < th dose independent rect. 19 10
999 136.78 humidity 70.0 1440 > th dose independent rect. 8 21