Os03g0226300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pto kinase interactor 1.
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Os03g0226300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pto kinase interactor 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.97 | 0.453 | 3.41 | -0.0297 | 0.313 | 3.99 | -0.657 | -8.8 | -0.0853 | 6.97 | 0.8332 | 20 | 0.914 | 2.59 |
| 101.9 | 0.47 | 3.41 | -0.00589 | 0.311 | 4.26 | -0.816 | -- | -0.0818 | 6.6 | 0.8435 | 16 | 0.944 | 2.58 |
| 93.99 | 0.452 | 3.41 | -0.0419 | 0.311 | 4 | -- | -8.92 | -0.0856 | 7.48 | 0.839 | 18 | 0.935 | 2.36 |
| 103.22 | 0.473 | 3.41 | -0.015 | 0.311 | 4.3 | -- | -- | -0.0825 | 7.56 | 0.8522 | 18 | 1.29 | 2.02 |
| 99.13 | 0.464 | 3.42 | -0.0387 | -- | 4.02 | -- | -8.93 | -0.0845 | -- | 0.848 | 18 | 0.955 | 2.35 |
| 140.54 | 0.556 | 3.4 | -0.00794 | 0.395 | -- | -1.05 | -- | -0.000621 | 5.65 | -- | -- | -- | -- |
| 143.18 | 0.56 | 3.39 | -0.0123 | 0.391 | -- | -- | -- | 0.00422 | 6.02 | -- | -- | -- | -- |
| 108.4 | 0.485 | 3.42 | -0.0108 | -- | 4.32 | -- | -- | -0.0814 | -- | 0.8616 | 18 | 0.884 | 2.44 |
| 103.22 | 0.473 | 3.41 | -- | 0.311 | 4.3 | -- | -- | -0.0809 | 7.56 | 0.8522 | 18 | 1.3 | 2.02 |
| 151.12 | 0.574 | 3.4 | -0.000927 | -- | -- | -- | -- | 0.0131 | -- | -- | -- | -- | -- |
| 143.19 | 0.56 | 3.39 | -- | 0.391 | -- | -- | -- | 0.00559 | 6.02 | -- | -- | -- | -- |
| 108.4 | 0.485 | 3.42 | -- | -- | 4.32 | -- | -- | -0.0801 | -- | 0.8616 | 18 | 0.891 | 2.44 |
| 151.12 | 0.574 | 3.4 | -- | -- | -- | -- | -- | 0.0132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.44 | wind | 1.0 | 30 | < th | dose dependent | rect. | 1 | 2 |
| 5 | 99.10 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 11 | 101.20 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 15 |
| 24 | 101.44 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 15 |
| 26 | 101.48 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 13 |
| 28 | 101.51 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 10 |
| 52 | 106.03 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 54 | 107.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 61 | 108.87 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 62 | 108.88 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 108 | 113.41 | wind | 1.0 | 10 | < th | dose independent | sin | 17 | NA |
| 116 | 114.53 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 2 |
| 122 | 115.22 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 169 | 117.17 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 206 | 119.42 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 210 | 119.73 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 211 | 119.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 223 | 120.01 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 255 | 120.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 258 | 120.90 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 266 | 120.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 268 | 120.94 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 269 | 120.94 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 273 | 120.94 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 275 | 120.94 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 280 | 120.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 281 | 120.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 284 | 120.94 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 289 | 120.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 293 | 121.01 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 322 | 121.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 328 | 121.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 333 | 121.58 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 349 | 121.74 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 350 | 121.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 353 | 121.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 357 | 121.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 366 | 121.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 367 | 121.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 387 | 121.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 423 | 122.88 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 433 | 123.23 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 435 | 123.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 436 | 123.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 473 | 124.30 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 564 | 125.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 586 | 125.67 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 647 | 126.59 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 651 | 126.62 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 738 | 127.30 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 760 | 127.81 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 12 |
| 771 | 127.94 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 892 | 128.46 | wind | 1.0 | 10 | < th | dose independent | no | NA | NA |
| 964 | 128.80 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |