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Os03g0223100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0327) R2 : 0.8
β1 : 4.3 (0.12) R2dD : 0.594 R2D : 0.535
β2 : 0.762 (0.0798) R2dC : 0.0407 R2C : 0.0188
β3 : -3.54 (0.284) R2dE : 0.0708 R2E : 0.0349
β4 : -2.85 (0.32) R2dD*C : 0.0362 R2D*C : 0.0437
β5 : 8.75 (0.909) R2dD*E : 0.0422 R2D*E : 0.0452
γ1 : 0.771 (0.07) R2dN8 : 0.0727 R2N8 : 0.00331
σ : 0.613
deviance : 170.37
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_____
C
peak time of C : 21.6
E
wheather : humidity
threshold : 94.49
memory length : 181
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 12.5
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.37 0.613 12.5 4.3 0.762 -3.54 -2.85 8.75 0.771 21.6 94.49 181 12.5 --
193.16 0.647 12.5 4.39 0.786 -4.08 -2.43 -- 0.786 20.9 94.81 219 12.7 --
194.16 0.649 12.5 4.41 0.752 -3.82 -- 8.74 0.803 21.2 94.67 221 13.2 --
214.57 0.682 12.5 4.44 0.774 -4.59 -- -- 0.743 21.5 94.81 219 12.7 --
228.38 0.704 12.5 4.38 -- -3.62 -- 8.24 0.777 -- 94.72 236 13.4 --
255.82 0.75 12.5 4.35 0.793 -- -2.95 -- 0.909 20.4 -- -- -- --
282.97 0.788 12.5 4.44 0.8 -- -- -- 0.909 20.3 -- -- -- --
249.29 0.735 12.5 4.44 -- -4.53 -- -- 0.747 -- 94.77 343 13 --
729.13 1.26 12.6 -- 0.621 -5.44 -- -- 0.296 21.6 94.92 331 12.8 --
318.39 0.834 12.5 4.43 -- -- -- -- 0.9 -- -- -- -- --
802.01 1.32 12.6 -- 0.782 -- -- -- 0.415 20.7 -- -- -- --
755.65 1.28 12.6 -- -- -5.57 -- -- 0.287 -- 94.94 336 12.8 --
836.56 1.35 12.6 -- -- -- -- -- 0.408 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 200.23 wind 1.0 270 < th dose dependent rect. 24 1
2 204.35 wind 1.0 270 < th dose independent rect. 23 2
6 210.28 radiation 1.0 1440 < th dose independent rect. 11 1
7 210.28 radiation 1.0 1440 < th dose dependent rect. 11 1
8 212.77 atmosphere 1005.0 270 < th dose independent rect. 23 2
9 213.41 temperature 20.0 90 > th dose independent rect. 21 8
10 214.01 atmosphere 1005.0 270 < th dose dependent rect. 1 1
13 214.63 radiation 1.0 1440 < th dose independent rect. 13 2
14 214.63 radiation 1.0 1440 < th dose dependent rect. 13 2
21 215.09 radiation 1.0 1440 > th dose independent rect. 13 2
22 215.34 atmosphere 1005.0 270 < th dose independent rect. 21 5
27 215.69 radiation 1.0 1440 > th dose independent rect. 8 7
30 215.72 radiation 1.0 1440 > th dose independent rect. 11 4
46 216.39 humidity 90.0 720 > th dose dependent rect. 20 1
64 217.27 wind 1.0 270 < th dose independent rect. 16 10
70 217.52 temperature 20.0 270 > th dose independent rect. 23 3
79 217.91 atmosphere 1005.0 10 < th dose dependent rect. 24 4
137 220.55 temperature 20.0 10 > th dose independent rect. 24 5
139 220.63 humidity 90.0 270 > th dose dependent rect. 20 6
142 220.75 radiation 1.0 1440 > th dose independent rect. 9 1
149 221.00 atmosphere 1005.0 720 > th dose independent rect. 19 5
158 221.58 temperature 20.0 90 > th dose independent rect. 11 18
167 221.87 radiation 1.0 1440 < th dose independent rect. 9 1
168 221.87 radiation 1.0 1440 < th dose dependent rect. 9 1
170 221.96 temperature 20.0 30 > th dose independent rect. 18 11
178 222.44 temperature 20.0 90 > th dose independent rect. 13 16
209 223.62 humidity 90.0 270 > th dose dependent rect. 10 16
231 224.46 atmosphere 1005.0 720 < th dose independent rect. 19 3
282 225.76 humidity 90.0 270 > th dose dependent rect. 23 3
296 225.98 temperature 20.0 270 > th dose dependent rect. 4 6
302 226.08 humidity 80.0 30 > th dose dependent rect. 24 5
323 226.48 humidity 60.0 270 > th dose dependent rect. 18 10
348 226.89 atmosphere 1015.0 90 < th dose dependent rect. 21 8
356 227.03 wind 1.0 90 > th dose independent sin 16 NA
357 227.03 humidity 90.0 30 > th dose independent rect. 24 5
375 227.28 precipitation 0.1 270 > th dose independent rect. 2 2
381 227.36 precipitation 0.1 270 > th dose dependent rect. 2 2
395 227.60 temperature 20.0 90 < th dose independent rect. 17 15
405 227.74 temperature 20.0 720 > th dose dependent rect. 5 2
409 227.84 wind 1.0 90 < th dose independent sin 16 NA
423 228.01 wind 1.0 270 < th dose dependent rect. 21 5
432 228.14 temperature 20.0 90 < th dose independent sin 12 NA
437 228.18 temperature 20.0 90 < th dose independent rect. 17 12
532 228.95 atmosphere 1005.0 720 > th dose independent rect. 23 1
534 228.97 wind 1.0 270 < th dose dependent rect. 15 11
548 229.15 temperature 20.0 90 > th dose independent sin 12 NA
647 229.88 humidity 90.0 270 > th dose dependent sin 17 NA
675 230.09 wind 3.0 90 < th dose dependent rect. 23 6
709 230.31 humidity 60.0 14400 > th dose independent rect. 7 1
736 230.49 temperature 25.0 90 < th dose independent rect. 24 15
789 230.74 radiation 1.0 1440 > th dose independent rect. 4 1
799 230.74 radiation 1.0 1440 > th dose dependent rect. 4 1
830 230.87 temperature 20.0 90 < th dose independent rect. 21 11
929 231.53 temperature 20.0 720 > th dose independent rect. 4 3
964 231.72 temperature 20.0 90 < th dose independent rect. 21 8
982 231.80 precipitation 0.1 30 > th dose independent rect. 3 11
991 231.81 precipitation 0.1 30 > th dose independent rect. 3 5