Os03g0222800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP40/DnaJ peptide-binding domain containing protein.
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Os03g0222800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP40/DnaJ peptide-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.78 | 0.348 | 7.74 | -0.851 | 0.546 | -1.61 | -0.419 | -0.448 | -0.0928 | 22.4 | 26.57 | 249 | -- | -- |
| 54.62 | 0.344 | 7.75 | -0.896 | 0.567 | -1.53 | -0.475 | -- | -0.0944 | 22.4 | 27.09 | 222 | -- | -- |
| 54.81 | 0.345 | 7.74 | -0.854 | 0.62 | -1.64 | -- | -0.366 | -0.104 | 22.8 | 27.27 | 201 | -- | -- |
| 55.1 | 0.346 | 7.75 | -0.92 | 0.606 | -1.62 | -- | -- | -0.111 | 22.9 | 27.37 | 200 | -- | -- |
| 65 | 0.375 | 7.74 | -1.03 | -- | -1.69 | -- | 0.336 | -0.14 | -- | 28.44 | 595 | -- | -- |
| 91.85 | 0.449 | 7.67 | -0.517 | 0.627 | -- | -0.637 | -- | 0.242 | 20.2 | -- | -- | -- | -- |
| 93.08 | 0.452 | 7.67 | -0.499 | 0.628 | -- | -- | -- | 0.241 | 20.2 | -- | -- | -- | -- |
| 65.11 | 0.376 | 7.74 | -0.964 | -- | -1.7 | -- | -- | -0.125 | -- | 28.3 | 589 | -- | -- |
| 75.09 | 0.404 | 7.71 | -- | 0.587 | -1.26 | -- | -- | 0.0582 | 22.2 | 27.38 | 190 | -- | -- |
| 114.82 | 0.501 | 7.66 | -0.504 | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
| 99.64 | 0.467 | 7.66 | -- | 0.631 | -- | -- | -- | 0.297 | 20.1 | -- | -- | -- | -- |
| 86.9 | 0.434 | 7.7 | -- | -- | -1.35 | -- | -- | 0.046 | -- | 28.5 | 531 | -- | -- |
| 121.51 | 0.515 | 7.64 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 18 | 57.10 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 23 | 57.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 26 | 57.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 29 | 57.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 38 | 57.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 46 | 57.97 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 61 | 58.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 64 | 58.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 73 | 58.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 78 | 58.54 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 93 | 58.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 94 | 58.82 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 99 | 58.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 101 | 58.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 129 | 59.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 181 | 60.08 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 182 | 60.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 197 | 60.39 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 207 | 60.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 210 | 60.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 226 | 60.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 255 | 60.99 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 258 | 61.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 262 | 61.01 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 276 | 61.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 345 | 61.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 410 | 61.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 450 | 62.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 536 | 62.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 588 | 62.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 589 | 62.51 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 622 | 62.59 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 640 | 62.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 643 | 62.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 657 | 62.69 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 673 | 62.74 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 859 | 63.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 860 | 63.08 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 940 | 63.18 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |