Os03g0221700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os03g0221700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.59 | 0.383 | 11.3 | -1.17 | 1.02 | 0.521 | 1.39 | -0.199 | 0.358 | 21 | 19.97 | 10 | -- | -- |
| 66.72 | 0.38 | 11.3 | -1.16 | 1.02 | 0.522 | 1.24 | -- | 0.358 | 21 | 19.92 | 9 | -- | -- |
| 70.38 | 0.391 | 11.3 | -1.13 | 1.03 | 0.525 | -- | 0.437 | 0.386 | 20.9 | 20 | 8 | -- | -- |
| 71.24 | 0.393 | 11.3 | -1.15 | 1.03 | 0.554 | -- | -- | 0.372 | 20.9 | 20.02 | 8 | -- | -- |
| 111.25 | 0.491 | 11.3 | -1.18 | -- | 0.941 | -- | 0.45 | 0.345 | -- | 16.85 | 9 | -- | -- |
| 77.65 | 0.413 | 11.3 | -1.16 | 1.33 | -- | 1.26 | -- | 0.374 | 21.9 | -- | -- | -- | -- |
| 83.78 | 0.429 | 11.3 | -1.21 | 1.33 | -- | -- | -- | 0.372 | 21.8 | -- | -- | -- | -- |
| 112.29 | 0.494 | 11.3 | -1.16 | -- | 0.942 | -- | -- | 0.344 | -- | 16.73 | 9 | -- | -- |
| 105.8 | 0.479 | 11.3 | -- | 0.961 | 0.708 | -- | -- | 0.406 | 20.4 | 20 | 8 | -- | -- |
| 189.15 | 0.643 | 11.2 | -1.19 | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
| 122.16 | 0.517 | 11.3 | -- | 1.32 | -- | -- | -- | 0.507 | 21.8 | -- | -- | -- | -- |
| 146.99 | 0.565 | 11.2 | -- | -- | 0.953 | -- | -- | 0.483 | -- | 16.34 | 10 | -- | -- |
| 226.67 | 0.703 | 11.2 | -- | -- | -- | -- | -- | 0.504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.98 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 5 | 61.69 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 33 | 62.97 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 47 | 63.09 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 57 | 63.42 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 23 |
| 58 | 63.49 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 64 | 63.55 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 81 | 63.73 | radiation | 40.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 83 | 63.77 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 84 | 63.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 97 | 64.07 | radiation | 20.0 | 90 | > th | dose independent | sin | 4 | NA |
| 98 | 64.07 | radiation | 20.0 | 90 | < th | dose independent | sin | 2 | NA |
| 100 | 64.07 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 22 | 16 |
| 107 | 64.14 | radiation | 20.0 | 10 | < th | dose independent | sin | 1 | NA |
| 152 | 64.31 | radiation | 10.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 158 | 64.35 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 22 |
| 178 | 64.41 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 189 | 64.52 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 190 | 64.53 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 19 |
| 241 | 64.75 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 13 |
| 307 | 64.94 | radiation | 40.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 358 | 65.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 384 | 65.15 | humidity | 70.0 | 10 | > th | dose independent | rect. | 4 | 14 |
| 484 | 65.31 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 500 | 65.36 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 502 | 65.37 | radiation | 20.0 | 10 | > th | dose independent | sin | 2 | NA |
| 542 | 65.46 | humidity | 80.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 565 | 65.53 | humidity | 80.0 | 90 | < th | dose independent | rect. | 23 | 15 |
| 609 | 65.63 | wind | 9.0 | 90 | < th | dose dependent | rect. | 14 | 19 |
| 761 | 65.88 | humidity | 80.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 778 | 65.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 815 | 65.95 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 853 | 65.97 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 859 | 65.98 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 895 | 66.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 925 | 66.06 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 939 | 66.07 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 957 | 66.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 961 | 66.11 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 19 |
| 965 | 66.11 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 19 |