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Os03g0220700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase, trypsin-like serine and cysteine domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0179) R2 : 0.586
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.902 (0.0454) R2dC : 0.359 R2C : 0.311
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.575 (0.0376) R2dN8 : 0.274 R2N8 : 0.227
σ : 0.337
deviance : 51.96
__
_____
C
peak time of C : 3.77
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.6 0.296 10.5 -0.657 0.973 0.338 -0.0777 -0.261 0.443 3.58 20.1 20 -- --
39.9 0.294 10.4 -0.612 0.979 0.357 0.0516 -- 0.453 3.57 20 21 -- --
39.62 0.293 10.5 -0.653 0.973 0.341 -- -0.24 0.443 3.57 20.09 20 -- --
39.9 0.294 10.4 -0.612 0.979 0.356 -- -- 0.453 3.57 20.01 21 -- --
69.61 0.389 10.4 -0.238 -- -0.397 -- -0.555 0.687 -- 28.2 70 -- --
44.87 0.314 10.4 -0.519 0.913 -- -0.0428 -- 0.517 3.77 -- -- -- --
44.88 0.314 10.4 -0.519 0.912 -- -- -- 0.517 3.77 -- -- -- --
63.32 0.371 10.4 -0.326 -- -0.595 -- -- 0.654 -- 26.7 195 -- --
49.39 0.327 10.4 -- 0.953 0.241 -- -- 0.524 3.62 20.1 26 -- --
90.81 0.445 10.4 -0.481 -- -- -- -- 0.542 -- -- -- -- --
51.96 0.337 10.4 -- 0.902 -- -- -- 0.575 3.77 -- -- -- --
66.08 0.379 10.4 -- -- -0.62 -- -- 0.695 -- 26.8 187 -- --
96.9 0.459 10.4 -- -- -- -- -- 0.595 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.00 humidity 90.0 4320 > th dose independent rect. 13 1
4 36.36 humidity 90.0 4320 > th dose dependent rect. 13 1
6 37.45 precipitation 0.1 4320 < th dose independent rect. 4 3
7 37.45 precipitation 0.1 4320 < th dose dependent rect. 4 3
8 37.46 precipitation 0.1 14400 < th dose independent rect. 7 9
9 37.46 precipitation 0.1 14400 < th dose dependent rect. 7 9
10 37.47 precipitation 0.1 14400 > th dose independent rect. 6 10
11 37.47 humidity 90.0 4320 > th dose dependent rect. 7 2
17 37.52 precipitation 0.1 4320 > th dose independent rect. 4 3
20 37.56 precipitation 0.1 4320 > th dose dependent rect. 4 3
21 37.58 humidity 90.0 14400 < th dose independent rect. 13 1
28 37.69 temperature 20.0 10 > th dose independent rect. 20 12
29 37.74 temperature 20.0 720 > th dose independent rect. 10 12
36 37.79 wind 3.0 43200 < th dose independent rect. 6 1
42 37.85 wind 3.0 43200 > th dose independent rect. 6 1
53 37.91 humidity 90.0 14400 > th dose dependent rect. 12 5
55 37.93 humidity 90.0 14400 > th dose dependent rect. 7 10
59 37.95 precipitation 0.1 14400 > th dose dependent rect. 6 10
61 37.96 precipitation 0.1 14400 < th dose independent rect. 14 2
62 37.96 precipitation 0.1 14400 < th dose dependent rect. 14 2
69 37.99 humidity 90.0 14400 > th dose dependent rect. 9 1
78 38.04 temperature 20.0 14400 < th dose independent rect. 20 1
84 38.06 precipitation 0.1 14400 > th dose independent rect. 14 2
85 38.06 humidity 90.0 14400 > th dose dependent rect. 15 1
87 38.06 precipitation 0.1 14400 > th dose dependent rect. 14 2
94 38.11 humidity 90.0 4320 > th dose dependent rect. 7 7
102 38.13 humidity 80.0 14400 > th dose dependent rect. 9 6
140 38.26 wind 5.0 43200 < th dose dependent rect. 5 2
143 38.28 wind 1.0 43200 > th dose dependent rect. 5 2
177 38.33 humidity 80.0 14400 > th dose independent rect. 10 1
180 38.34 radiation 1.0 4320 < th dose dependent rect. 7 7
209 38.42 wind 3.0 43200 > th dose independent rect. 1 7
210 38.42 wind 3.0 43200 < th dose independent rect. 1 7
219 38.44 humidity 90.0 720 > th dose dependent rect. 16 1
228 38.47 humidity 80.0 14400 > th dose independent rect. 10 5
233 38.48 humidity 90.0 14400 > th dose independent rect. 7 11
247 38.50 wind 1.0 43200 < th dose dependent rect. 12 1
267 38.53 humidity 90.0 14400 > th dose independent rect. 7 3
284 38.55 radiation 1.0 4320 > th dose independent rect. 7 8
286 38.55 temperature 20.0 720 < th dose independent rect. 11 13
295 38.57 radiation 1.0 4320 < th dose independent rect. 7 8
301 38.58 humidity 90.0 14400 > th dose independent rect. 7 7
307 38.58 radiation 1.0 4320 < th dose dependent rect. 7 3
314 38.59 humidity 90.0 14400 > th dose dependent sin 23 NA
316 38.59 temperature 20.0 90 < th dose dependent rect. 14 20
319 38.59 temperature 20.0 10 < th dose dependent rect. 13 22
331 38.60 temperature 20.0 90 < th dose dependent rect. 14 16
334 38.60 temperature 20.0 10 < th dose dependent rect. 15 19
339 38.61 humidity 90.0 14400 > th dose independent rect. 7 1
362 38.63 humidity 80.0 14400 < th dose independent rect. 10 1
367 38.63 wind 5.0 43200 < th dose dependent rect. 1 1
381 38.64 humidity 90.0 14400 > th dose independent rect. 16 1
400 38.65 temperature 20.0 10 < th dose dependent rect. 13 18
402 38.66 humidity 90.0 720 > th dose independent rect. 16 1
403 38.66 precipitation 0.1 14400 > th dose independent rect. 7 1
408 38.66 precipitation 0.1 14400 > th dose dependent rect. 7 1
411 38.66 temperature 20.0 10 < th dose dependent rect. 15 16
430 38.68 temperature 20.0 14400 > th dose independent rect. 18 1
432 38.68 humidity 80.0 14400 < th dose independent rect. 10 5
476 38.70 wind 9.0 14400 < th dose independent rect. 9 2
489 38.71 humidity 80.0 1440 < th dose independent rect. 11 1
512 38.73 radiation 1.0 4320 < th dose independent rect. 7 3
515 38.73 humidity 90.0 14400 < th dose independent rect. 7 8
519 38.73 wind 5.0 43200 < th dose dependent rect. 22 10
541 38.76 temperature 20.0 720 < th dose independent sin 19 NA
544 38.76 radiation 1.0 4320 > th dose independent rect. 7 3
580 38.78 humidity 90.0 14400 < th dose independent rect. 7 11
607 38.80 temperature 20.0 270 > th dose independent rect. 17 13
632 38.82 precipitation 0.1 14400 < th dose independent rect. 9 1
633 38.82 temperature 20.0 14400 > th dose independent rect. 18 3
639 38.82 precipitation 0.1 14400 < th dose dependent rect. 9 1
649 38.83 precipitation 0.1 14400 < th dose independent rect. 7 1
657 38.83 precipitation 0.1 14400 < th dose dependent rect. 7 1
662 38.83 wind 5.0 43200 < th dose dependent rect. 1 7
666 38.84 temperature 20.0 14400 > th dose independent rect. 20 1
717 38.88 temperature 20.0 720 > th dose independent sin 19 NA
758 38.90 wind 1.0 43200 > th dose dependent rect. 22 10
761 38.91 precipitation 0.1 14400 > th dose independent rect. 9 1
762 38.91 humidity 80.0 43200 > th dose independent rect. 5 2
766 38.91 humidity 90.0 14400 > th dose independent rect. 11 10
771 38.91 precipitation 0.1 14400 > th dose dependent rect. 9 1
780 38.92 humidity 90.0 14400 > th dose independent sin 22 NA
795 38.93 humidity 80.0 43200 < th dose independent rect. 5 2
816 38.94 temperature 25.0 14400 < th dose dependent rect. 9 1
832 38.95 wind 1.0 43200 > th dose dependent rect. 1 7
840 38.96 humidity 90.0 14400 < th dose independent rect. 7 3
859 38.97 humidity 90.0 14400 < th dose independent rect. 8 1
861 38.97 wind 9.0 14400 > th dose independent rect. 6 5
877 38.97 humidity 60.0 90 > th dose dependent rect. 5 18
879 38.98 wind 3.0 43200 > th dose independent rect. 1 3
888 38.98 temperature 20.0 30 < th dose independent rect. 15 15
895 38.98 radiation 1.0 4320 < th dose dependent rect. 7 10
900 38.99 temperature 20.0 10 > th dose independent sin 9 NA
909 38.99 temperature 20.0 270 < th dose independent rect. 14 14
914 38.99 temperature 20.0 90 < th dose dependent sin 10 NA
926 39.00 temperature 20.0 10 < th dose independent sin 10 NA
930 39.00 wind 9.0 14400 < th dose independent rect. 7 4
971 39.02 wind 3.0 43200 < th dose independent rect. 1 3