Os03g0219900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment).
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Os03g0219900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.85 | 0.501 | 14.4 | 0.322 | 1.4 | -1.9 | 0.032 | -6.28 | -0.375 | 22.2 | 7 | 12 | -- | -- |
| 124.57 | 0.52 | 14.4 | 0.408 | 1.38 | -0.307 | 0.28 | -- | -0.41 | 22.2 | 5.9 | 117 | -- | -- |
| 113.85 | 0.497 | 14.4 | 0.321 | 1.4 | -1.91 | -- | -6.3 | -0.375 | 22.2 | 7.005 | 12 | -- | -- |
| 123.74 | 0.518 | 14.4 | 0.42 | 1.43 | -0.443 | -- | -- | -0.417 | 22.4 | 6 | 1169 | -- | -- |
| 231.5 | 0.709 | 14.4 | 0.298 | -- | -1.96 | -- | -5.73 | -0.416 | -- | 7.021 | 18 | -- | -- |
| 125.99 | 0.526 | 14.4 | 0.467 | 1.39 | -- | 0.279 | -- | -0.406 | 22.4 | -- | -- | -- | -- |
| 126.3 | 0.526 | 14.4 | 0.456 | 1.39 | -- | -- | -- | -0.407 | 22.4 | -- | -- | -- | -- |
| 204.96 | 0.667 | 14.4 | 0.592 | -- | 1.16 | -- | -- | -0.523 | -- | 3.2 | 721 | -- | -- |
| 126.22 | 0.523 | 14.5 | -- | 1.46 | -0.563 | -- | -- | -0.475 | 22.3 | 6.33 | 2612 | -- | -- |
| 243.91 | 0.73 | 14.4 | 0.479 | -- | -- | -- | -- | -0.402 | -- | -- | -- | -- | -- |
| 131.79 | 0.537 | 14.5 | -- | 1.39 | -- | -- | -- | -0.457 | 22.4 | -- | -- | -- | -- |
| 218.86 | 0.689 | 14.4 | -- | -- | 0.984 | -- | -- | -0.534 | -- | 3.1 | 718 | -- | -- |
| 249.96 | 0.738 | 14.4 | -- | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 2 | 111.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 12 | 111.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 23 | 111.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 24 | 112.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 33 | 112.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 8 |
| 34 | 112.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 35 | 112.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 36 | 112.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 55 | 112.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 56 | 112.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 63 | 112.53 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 72 | 112.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 77 | 112.63 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 111 | 112.81 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 124 | 112.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 126 | 112.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 135 | 112.93 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 142 | 112.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 184 | 113.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 185 | 113.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 199 | 113.16 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 201 | 113.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 204 | 113.17 | temperature | 20.0 | 270 | > th | dose independent | sin | 5 | NA |
| 214 | 113.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 224 | 113.24 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 228 | 113.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 232 | 113.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 234 | 113.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 247 | 113.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 249 | 113.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 260 | 113.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 261 | 113.36 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 267 | 113.37 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 268 | 113.37 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 279 | 113.38 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 321 | 113.49 | humidity | 90.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 331 | 113.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 333 | 113.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 340 | 113.53 | temperature | 20.0 | 270 | < th | dose independent | sin | 3 | NA |
| 367 | 113.58 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 404 | 113.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 434 | 113.71 | humidity | 60.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 462 | 113.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 21 |
| 532 | 113.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 535 | 113.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 540 | 113.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 542 | 113.93 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 549 | 113.95 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 580 | 114.00 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 597 | 114.02 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 626 | 114.06 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 633 | 114.07 | wind | 5.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 677 | 114.17 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 14 |
| 691 | 114.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 698 | 114.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 721 | 114.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 764 | 114.30 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 769 | 114.30 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 772 | 114.31 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 786 | 114.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 791 | 114.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 815 | 114.38 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 822 | 114.40 | humidity | 90.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 823 | 114.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 14 |
| 831 | 114.40 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 847 | 114.43 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 868 | 114.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 887 | 114.48 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 898 | 114.50 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 901 | 114.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 968 | 114.58 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 979 | 114.59 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 988 | 114.60 | temperature | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |