Os03g0219800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0219800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.13 | 0.278 | 10.1 | 0.142 | 0.279 | -0.298 | 0.000713 | 4.97 | 0.393 | 20.7 | 30 | 4524 | -- | -- |
| 38.25 | 0.29 | 9.95 | 1 | 0.307 | 0.24 | -0.104 | -- | 0.477 | 19 | 29.5 | 45992 | -- | -- |
| 35.05 | 0.276 | 10.1 | 0.0939 | 0.287 | -0.314 | -- | 5.15 | 0.396 | 20.6 | 30.09 | 4924 | -- | -- |
| 38.28 | 0.29 | 9.95 | 1 | 0.306 | 0.24 | -- | -- | 0.477 | 19.1 | 29.5 | 45992 | -- | -- |
| 39.52 | 0.293 | 10.1 | 0.018 | -- | -0.393 | -- | 5.47 | 0.407 | -- | 30.02 | 4947 | -- | -- |
| 40.62 | 0.299 | 9.95 | 0.96 | 0.28 | -- | -0.0527 | -- | 0.475 | 20.3 | -- | -- | -- | -- |
| 40.62 | 0.298 | 9.95 | 0.962 | 0.28 | -- | -- | -- | 0.474 | 20.3 | -- | -- | -- | -- |
| 43.08 | 0.307 | 9.94 | 0.996 | -- | 0.146 | -- | -- | 0.495 | -- | 27.11 | 47520 | -- | -- |
| 43.96 | 0.309 | 10 | -- | 0.276 | -0.736 | -- | -- | 0.196 | 20.2 | 18.26 | 47520 | -- | -- |
| 44.96 | 0.313 | 9.94 | 0.96 | -- | -- | -- | -- | 0.471 | -- | -- | -- | -- | -- |
| 65 | 0.377 | 9.97 | -- | 0.276 | -- | -- | -- | 0.367 | 20.6 | -- | -- | -- | -- |
| 48.17 | 0.323 | 10 | -- | -- | -0.737 | -- | -- | 0.193 | -- | 18.23 | 47520 | -- | -- |
| 69.27 | 0.388 | 9.97 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 2 | 32.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 6 | 33.56 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 9 | 33.65 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 12 | 33.68 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 13 | 33.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 25 | 33.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 32 | 33.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 15 |
| 37 | 33.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 41 | 33.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 43 | 33.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 55 | 34.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 56 | 34.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 59 | 34.06 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 60 | 34.06 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 68 | 34.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 69 | 34.09 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 78 | 34.13 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 93 | 34.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 96 | 34.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 100 | 34.20 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 106 | 34.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 109 | 34.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 11 |
| 112 | 34.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 11 |
| 119 | 34.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 123 | 34.26 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 124 | 34.26 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 130 | 34.27 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 131 | 34.27 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 137 | 34.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 11 |
| 181 | 34.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 17 |
| 183 | 34.38 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 198 | 34.42 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 3 |
| 199 | 34.42 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 219 | 34.46 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 224 | 34.47 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 225 | 34.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 258 | 34.51 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 4 |
| 272 | 34.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 275 | 34.53 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 23 | NA |
| 296 | 34.57 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 306 | 34.58 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 311 | 34.58 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 322 | 34.59 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 332 | 34.60 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 333 | 34.60 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 357 | 34.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 367 | 34.62 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 420 | 34.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 424 | 34.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 437 | 34.78 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 445 | 34.80 | wind | 1.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 531 | 34.90 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 551 | 34.91 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 577 | 34.94 | wind | 1.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 587 | 34.94 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 596 | 34.95 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 629 | 34.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 22 |
| 661 | 34.98 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 680 | 35.00 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 693 | 35.00 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 697 | 35.01 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 704 | 35.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 721 | 35.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 762 | 35.05 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 771 | 35.06 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 793 | 35.08 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 854 | 35.11 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 886 | 35.13 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 8 |
| 921 | 35.14 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 12 |
| 935 | 35.14 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 18 |
| 939 | 35.14 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 962 | 35.15 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 963 | 35.15 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 8 |