Os03g0218400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexose transporter.
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Os03g0218400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.46 | 0.686 | 12.6 | 2.41 | 1.46 | -2.32 | -0.543 | -3.11 | 0.846 | 4.61 | 15.61 | 30 | 8.98 | -- |
| 220.04 | 0.691 | 12.6 | 2.76 | 1.66 | -2.15 | 0.424 | -- | 0.956 | 5.1 | 17.63 | 49 | 8.73 | -- |
| 213.18 | 0.68 | 12.6 | 2.41 | 1.71 | -2.05 | -- | -2.65 | 0.863 | 4.92 | 17.1 | 37 | 8.47 | -- |
| 220.34 | 0.691 | 12.6 | 2.78 | 1.68 | -2.22 | -- | -- | 0.936 | 4.88 | 17.3 | 68 | 8.81 | -- |
| 228.23 | 0.704 | 12.7 | 2.63 | -- | -3.56 | -- | -2.46 | 0.837 | -- | 9.982 | 58 | 11.2 | -- |
| 276.57 | 0.78 | 12.6 | 2.41 | 2.79 | -- | 1.55 | -- | 0.7 | 6.47 | -- | -- | -- | -- |
| 282.48 | 0.787 | 12.6 | 2.43 | 2.79 | -- | -- | -- | 0.694 | 6.42 | -- | -- | -- | -- |
| 232.96 | 0.711 | 12.6 | 2.83 | -- | -3.63 | -- | -- | 0.907 | -- | 9.86 | 150 | 12.1 | -- |
| 414.82 | 0.954 | 12.7 | -- | 2.02 | -1.38 | -- | -- | 0.557 | 5.78 | 17.3 | 68 | 8.81 | -- |
| 688.33 | 1.23 | 12.7 | 2.5 | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
| 438.28 | 0.979 | 12.7 | -- | 2.83 | -- | -- | -- | 0.424 | 6.37 | -- | -- | -- | -- |
| 426.9 | 0.962 | 12.7 | -- | -- | -3.22 | -- | -- | 0.506 | -- | -9.698 | 103 | 12.2 | -- |
| 853.6 | 1.36 | 12.7 | -- | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 3 | 213.83 | temperature | 15.0 | 30 | > th | dose dependent | sin | 15 | NA |
| 8 | 214.60 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 66 | 218.98 | temperature | 30.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 108 | 220.76 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 160 | 223.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 166 | 223.42 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 180 | 223.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 205 | 224.46 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 307 | 226.74 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 8 |
| 313 | 226.81 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 333 | 227.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 341 | 227.32 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 383 | 228.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 397 | 228.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 469 | 229.68 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 8 |
| 474 | 229.77 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 499 | 230.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 521 | 230.67 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 534 | 231.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 591 | 231.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 657 | 232.56 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 737 | 233.50 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 784 | 233.98 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 811 | 234.22 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 815 | 234.26 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 873 | 234.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 874 | 234.53 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 11 |
| 875 | 234.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 889 | 234.66 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 914 | 234.91 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 948 | 235.13 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 977 | 235.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 988 | 235.17 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 3 |