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Os03g0217900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.026) R2 : 0.177
β1 : 0.865 (0.0952) R2dD : 0.155 R2D : 0.102
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.308 (0.0555) R2dN8 : 0.0748 R2N8 : 0.0219
σ : 0.488
deviance : 108.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.22 0.444 10.4 0.188 0.602 0.536 -0.122 -1.89 -0.0315 7.63 25.1 747 -- --
91.71 0.449 10.4 0.752 0.541 0.349 0.508 -- 0.125 5.28 24.7 853 -- --
89.25 0.44 10.4 0.202 0.602 0.533 -- -1.82 -0.0251 7.62 25.16 746 -- --
92.35 0.451 10.4 0.753 0.543 0.346 -- -- 0.124 5.21 24.7 853 -- --
100.27 0.466 10.4 0.207 -- 0.497 -- -1.82 0.0814 -- 26.5 5474 -- --
100.07 0.469 10.4 0.848 0.397 -- 0.472 -- 0.302 6.66 -- -- -- --
100.62 0.47 10.4 0.855 0.399 -- -- -- 0.3 6.59 -- -- -- --
101.33 0.469 10.4 0.739 -- 0.462 -- -- 0.158 -- 24.5 1446 -- --
94.97 0.454 10.4 -- 0.392 0.825 -- -- 0.0185 6.43 18.4 30976 -- --
108.91 0.488 10.4 0.865 -- -- -- -- 0.308 -- -- -- -- --
119.9 0.512 10.4 -- 0.41 -- -- -- 0.205 6.47 -- -- -- --
102.97 0.473 10.4 -- -- 0.845 -- -- 0.0575 -- 17.4 31587 -- --
128.64 0.529 10.4 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.01 radiation 10.0 43200 < th dose dependent rect. 19 8
9 84.05 radiation 20.0 10 < th dose dependent rect. 2 16
13 84.42 temperature 10.0 270 > th dose dependent rect. 17 7
16 84.80 wind 5.0 90 < th dose independent rect. 6 19
24 85.17 temperature 25.0 90 < th dose independent rect. 1 20
25 85.19 humidity 80.0 43200 < th dose dependent rect. 8 1
26 85.26 radiation 40.0 4320 < th dose dependent rect. 19 10
28 85.28 radiation 40.0 43200 < th dose independent rect. 16 3
32 85.37 temperature 10.0 10 > th dose dependent rect. 7 18
34 85.44 temperature 25.0 10 < th dose independent rect. 12 8
38 85.47 wind 9.0 90 < th dose dependent rect. 6 19
40 85.51 radiation 1.0 270 < th dose independent rect. 22 20
43 85.55 humidity 70.0 43200 > th dose dependent rect. 7 1
45 85.59 temperature 15.0 90 > th dose independent rect. 18 7
56 85.76 radiation 1.0 270 < th dose dependent rect. 23 19
75 85.99 temperature 25.0 30 < th dose independent rect. 12 19
84 86.06 temperature 25.0 720 > th dose independent rect. 2 17
86 86.07 temperature 15.0 10 > th dose independent rect. 7 18
90 86.11 temperature 15.0 270 > th dose independent rect. 16 8
94 86.13 temperature 30.0 10 < th dose independent rect. 18 8
109 86.27 radiation 40.0 270 < th dose independent rect. 6 18
110 86.29 temperature 30.0 90 < th dose dependent rect. 1 6
111 86.30 radiation 40.0 43200 < th dose independent rect. 16 5
115 86.34 wind 5.0 90 > th dose independent rect. 13 8
118 86.35 temperature 30.0 10 < th dose dependent rect. 2 5
124 86.39 radiation 1.0 90 < th dose independent rect. 1 17
128 86.43 humidity 80.0 43200 > th dose independent rect. 7 1
129 86.43 humidity 60.0 30 > th dose independent rect. 18 8
150 86.56 radiation 10.0 10 < th dose dependent sin 2 NA
153 86.58 radiation 1.0 30 < th dose dependent rect. 18 8
157 86.61 radiation 20.0 10 < th dose dependent sin 4 NA
159 86.62 wind 9.0 10 < th dose dependent rect. 7 19
166 86.65 temperature 30.0 270 < th dose dependent rect. 1 3
177 86.68 temperature 25.0 720 > th dose independent sin 1 NA
179 86.69 radiation 40.0 43200 < th dose independent rect. 16 15
183 86.70 temperature 10.0 1440 > th dose independent rect. 19 8
186 86.70 temperature 30.0 1440 < th dose independent rect. 19 8
190 86.70 humidity 50.0 1440 > th dose independent rect. 19 8
192 86.70 atmosphere 995.0 1440 > th dose independent rect. 19 8
193 86.70 radiation 1.0 1440 < th dose independent rect. 19 8
213 86.70 temperature 10.0 1440 > th dose independent rect. 3 16
228 86.74 wind 7.0 270 < th dose independent rect. 4 21
235 86.79 radiation 1.0 30 < th dose independent rect. 18 8
242 86.81 wind 3.0 90 > th dose dependent rect. 13 8
259 86.91 temperature 30.0 10 < th dose dependent rect. 13 18
261 86.93 wind 7.0 270 < th dose independent rect. 16 8
272 86.96 radiation 1.0 10 < th dose dependent rect. 5 13
274 86.97 temperature 25.0 720 < th dose independent rect. 7 13
290 87.06 radiation 40.0 43200 < th dose independent rect. 16 8
304 87.13 radiation 1.0 30 < th dose independent rect. 5 13
314 87.15 radiation 10.0 10 < th dose independent rect. 2 16
320 87.17 temperature 10.0 270 > th dose dependent rect. 18 16
321 87.18 temperature 25.0 720 < th dose independent rect. 5 16
342 87.24 temperature 25.0 10 < th dose independent rect. 13 5
343 87.24 temperature 25.0 720 < th dose independent rect. 8 11
352 87.27 temperature 25.0 90 > th dose independent rect. 17 22
356 87.28 temperature 25.0 720 < th dose independent sin 23 NA
359 87.28 precipitation 0.1 90 < th dose independent rect. 6 19
363 87.28 precipitation 0.1 90 < th dose dependent rect. 6 19
364 87.29 atmosphere 1000.0 90 > th dose independent rect. 1 5
370 87.32 wind 9.0 270 < th dose dependent rect. 15 8
383 87.38 precipitation 0.1 270 < th dose independent rect. 3 23
385 87.38 precipitation 0.1 270 < th dose dependent rect. 3 23
401 87.43 wind 5.0 90 > th dose independent rect. 13 18
409 87.45 precipitation 0.1 90 < th dose independent rect. 18 7
413 87.45 precipitation 0.1 90 < th dose dependent rect. 18 7
421 87.47 wind 9.0 270 < th dose independent rect. 3 23
422 87.47 radiation 20.0 14400 < th dose dependent rect. 18 13
425 87.48 temperature 15.0 90 > th dose independent rect. 1 17
456 87.55 radiation 10.0 43200 < th dose dependent rect. 19 17
459 87.56 radiation 10.0 43200 < th dose dependent rect. 4 8
508 87.59 humidity 50.0 90 > th dose dependent rect. 1 5
517 87.61 radiation 40.0 270 < th dose independent rect. 5 8
518 87.61 radiation 20.0 30 < th dose independent rect. 12 19
522 87.62 radiation 30.0 90 < th dose independent rect. 13 17
523 87.62 radiation 40.0 270 < th dose independent rect. 18 17
538 87.65 humidity 50.0 10 > th dose dependent rect. 2 5
545 87.66 radiation 1.0 270 < th dose independent rect. 23 7
546 87.66 precipitation 0.1 10 < th dose independent rect. 7 19
558 87.66 precipitation 0.1 10 < th dose dependent rect. 7 19
559 87.67 wind 9.0 90 < th dose independent rect. 1 5
560 87.67 temperature 10.0 90 > th dose independent rect. 1 5
562 87.67 temperature 30.0 90 < th dose independent rect. 1 5
563 87.67 humidity 50.0 90 > th dose independent rect. 1 5
567 87.67 atmosphere 1010.0 90 < th dose independent rect. 1 5
569 87.67 radiation 20.0 90 < th dose independent rect. 1 5
580 87.69 atmosphere 1000.0 10 > th dose independent rect. 2 5
582 87.69 radiation 20.0 14400 < th dose dependent rect. 22 9
590 87.70 radiation 20.0 14400 < th dose dependent rect. 24 7
595 87.71 humidity 70.0 43200 > th dose independent rect. 7 3
598 87.71 radiation 1.0 4320 < th dose independent rect. 19 10
605 87.72 humidity 50.0 10 > th dose independent rect. 7 19
607 87.73 precipitation 0.1 270 < th dose independent rect. 16 8
609 87.73 radiation 20.0 14400 < th dose dependent rect. 4 3
611 87.73 precipitation 0.1 270 < th dose dependent rect. 16 8
617 87.74 humidity 50.0 90 > th dose independent rect. 6 19
629 87.75 radiation 10.0 43200 < th dose dependent sin 7 NA
632 87.75 humidity 50.0 10 > th dose dependent rect. 24 7
647 87.76 wind 1.0 270 > th dose independent rect. 10 8
649 87.76 wind 5.0 90 > th dose independent rect. 13 12
652 87.76 atmosphere 1015.0 90 < th dose independent rect. 1 17
665 87.77 temperature 25.0 270 < th dose independent rect. 2 1
666 87.77 precipitation 0.1 90 < th dose independent rect. 1 5
668 87.77 atmosphere 995.0 90 > th dose independent rect. 18 7
669 87.77 precipitation 0.1 270 < th dose independent rect. 6 17
672 87.77 precipitation 0.1 90 < th dose dependent rect. 1 5
680 87.77 precipitation 0.1 270 < th dose dependent rect. 6 17
709 87.80 radiation 10.0 43200 < th dose dependent rect. 6 4
730 87.81 wind 3.0 90 > th dose dependent rect. 13 5
743 87.82 precipitation 0.1 270 < th dose independent rect. 4 21
748 87.82 precipitation 0.1 270 < th dose dependent rect. 4 21
753 87.83 radiation 40.0 10 < th dose dependent rect. 13 18
760 87.85 wind 5.0 90 > th dose independent rect. 13 14
775 87.86 radiation 40.0 90 < th dose dependent rect. 1 5
821 87.90 atmosphere 1000.0 270 > th dose independent rect. 2 1
822 87.90 atmosphere 1000.0 270 > th dose independent rect. 1 3
835 87.91 radiation 1.0 270 < th dose dependent rect. 23 7
836 87.92 wind 9.0 10 < th dose independent rect. 2 5
837 87.92 temperature 10.0 10 > th dose independent rect. 2 5
839 87.92 temperature 30.0 10 < th dose independent rect. 2 5
840 87.92 humidity 50.0 10 > th dose independent rect. 2 5
844 87.92 atmosphere 1015.0 10 < th dose independent rect. 2 5
845 87.92 radiation 20.0 10 < th dose independent rect. 2 5
859 87.93 radiation 40.0 10 < th dose dependent rect. 2 5
864 87.94 atmosphere 1000.0 270 > th dose independent rect. 23 7
886 87.96 radiation 1.0 14400 > th dose dependent rect. 18 13
891 87.97 humidity 70.0 43200 < th dose independent rect. 7 3
902 87.98 radiation 20.0 14400 < th dose independent rect. 16 15
939 88.02 wind 1.0 270 > th dose independent rect. 24 17
957 88.04 atmosphere 1005.0 4320 > th dose dependent rect. 6 1
986 88.08 radiation 10.0 43200 > th dose independent rect. 17 15
990 88.08 atmosphere 995.0 90 > th dose independent rect. 6 19