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Os03g0217400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.81 (0.0182) R2 : 0.22
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.435 (0.0383) R2dN8 : 0.284 R2N8 : 0.22
σ : 0.343
deviance : 53.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.34 0.287 8.79 -0.0902 0.494 -0.27 0.433 4.4 0.415 5.18 995.2 1803 -- --
37.71 0.286 8.8 -0.17 0.502 0.549 0.404 -- 0.418 5.1 995.6 1122 -- --
37.8 0.286 8.79 -0.0874 0.498 -0.292 -- 4.58 0.413 5.13 995.2 1793 -- --
38.13 0.288 8.81 -0.173 0.497 0.56 -- -- 0.417 5.08 995.7 1122 -- --
50.64 0.331 8.8 -0.052 -- -0.273 -- 5.23 0.41 -- 995.8 1772 -- --
39.63 0.295 8.81 -0.149 0.503 -- 0.438 -- 0.409 5.07 -- -- -- --
40.11 0.297 8.81 -0.149 0.506 -- -- -- 0.407 5.02 -- -- -- --
50.93 0.332 8.81 -0.16 -- 0.726 -- -- 0.435 -- 996.5 1149 -- --
38.92 0.291 8.81 -- 0.495 0.527 -- -- 0.432 5.09 995.7 1122 -- --
53.54 0.342 8.81 -0.131 -- -- -- -- 0.42 -- -- -- -- --
40.7 0.298 8.8 -- 0.503 -- -- -- 0.424 5.03 -- -- -- --
51.59 0.335 8.81 -- -- 0.69 -- -- 0.448 -- 996.5 1142 -- --
53.99 0.343 8.81 -- -- -- -- -- 0.435 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.74 atmosphere 995.0 1440 > th dose independent rect. 18 19
2 36.74 temperature 25.0 90 > th dose dependent rect. 20 12
6 36.86 atmosphere 1015.0 90 < th dose dependent rect. 19 13
7 36.88 atmosphere 1015.0 10 < th dose dependent rect. 19 14
24 37.12 atmosphere 995.0 4320 < th dose dependent rect. 17 12
38 37.15 temperature 25.0 90 > th dose independent rect. 20 12
42 37.16 atmosphere 1015.0 720 < th dose dependent rect. 19 3
45 37.18 atmosphere 995.0 4320 < th dose independent sin 9 NA
47 37.19 atmosphere 1010.0 270 < th dose independent rect. 10 12
49 37.20 atmosphere 1015.0 720 < th dose dependent rect. 21 1
50 37.20 atmosphere 995.0 4320 < th dose dependent rect. 18 6
53 37.22 temperature 15.0 720 > th dose independent rect. 3 19
54 37.22 atmosphere 995.0 720 > th dose independent rect. 15 19
55 37.22 wind 3.0 1440 > th dose dependent rect. 2 1
56 37.22 wind 5.0 1440 > th dose dependent rect. 1 4
60 37.25 temperature 20.0 10 > th dose dependent rect. 21 12
61 37.25 atmosphere 1015.0 30 < th dose dependent rect. 21 12
79 37.27 temperature 15.0 270 > th dose independent rect. 10 12
87 37.28 wind 5.0 1440 > th dose independent rect. 1 4
94 37.30 atmosphere 995.0 1440 > th dose independent rect. 17 3
95 37.30 atmosphere 995.0 1440 > th dose independent rect. 13 4
97 37.30 atmosphere 995.0 4320 < th dose independent rect. 18 12
109 37.31 atmosphere 995.0 4320 > th dose independent sin 9 NA
110 37.31 wind 5.0 1440 > th dose independent rect. 24 7
112 37.31 atmosphere 995.0 4320 > th dose independent rect. 17 12
113 37.31 atmosphere 995.0 4320 > th dose independent rect. 17 14
128 37.33 wind 3.0 1440 > th dose independent rect. 2 1
129 37.33 temperature 15.0 720 > th dose independent rect. 10 5
130 37.33 wind 5.0 1440 < th dose independent rect. 24 7
151 37.34 temperature 15.0 720 > th dose independent rect. 10 14
154 37.34 temperature 15.0 720 > th dose independent rect. 10 22
158 37.34 atmosphere 1000.0 270 < th dose dependent rect. 16 16
173 37.36 atmosphere 1000.0 1440 < th dose dependent rect. 21 1
179 37.37 wind 5.0 1440 < th dose independent rect. 1 4
187 37.38 atmosphere 995.0 4320 > th dose independent rect. 17 5
189 37.38 atmosphere 995.0 4320 > th dose independent rect. 17 7
222 37.40 atmosphere 1000.0 270 < th dose independent rect. 15 16
223 37.40 atmosphere 995.0 1440 > th dose independent rect. 13 20
225 37.40 wind 5.0 1440 > th dose dependent rect. 24 7
230 37.41 precipitation 0.1 1440 < th dose independent rect. 22 1
239 37.41 precipitation 0.1 1440 < th dose dependent rect. 22 1
244 37.42 wind 3.0 1440 < th dose independent rect. 2 1
248 37.42 atmosphere 995.0 720 > th dose independent rect. 16 9
254 37.42 atmosphere 995.0 1440 > th dose independent rect. 13 18
256 37.42 temperature 15.0 720 > th dose independent rect. 10 20
266 37.43 radiation 40.0 720 < th dose independent rect. 3 9
273 37.44 precipitation 0.1 1440 > th dose independent rect. 2 2
277 37.44 atmosphere 995.0 1440 > th dose independent rect. 13 10
297 37.45 atmosphere 1000.0 720 < th dose dependent rect. 16 10
309 37.46 precipitation 0.1 1440 > th dose dependent rect. 2 2
326 37.47 atmosphere 995.0 1440 > th dose independent rect. 13 23
334 37.48 atmosphere 1000.0 720 < th dose independent rect. 19 3
355 37.49 atmosphere 995.0 1440 > th dose independent rect. 13 12
361 37.49 wind 3.0 4320 < th dose dependent rect. 2 1
367 37.50 atmosphere 1000.0 720 < th dose independent rect. 20 1
371 37.50 atmosphere 995.0 4320 > th dose independent rect. 9 11
378 37.50 radiation 40.0 10 > th dose independent rect. 13 23
379 37.50 atmosphere 995.0 4320 < th dose dependent sin 10 NA
385 37.51 atmosphere 995.0 1440 < th dose independent rect. 17 2
405 37.51 humidity 60.0 10 > th dose independent rect. 12 12
423 37.51 atmosphere 995.0 720 > th dose independent rect. 22 22
434 37.52 wind 7.0 1440 < th dose independent rect. 21 4
447 37.52 temperature 15.0 720 > th dose independent rect. 12 10
468 37.52 atmosphere 995.0 1440 < th dose dependent rect. 17 2
501 37.53 precipitation 0.1 1440 < th dose independent rect. 2 2
505 37.53 wind 7.0 1440 > th dose independent rect. 21 8
518 37.53 atmosphere 1000.0 270 < th dose dependent sin 12 NA
519 37.53 precipitation 0.1 1440 < th dose dependent rect. 2 2
548 37.54 precipitation 0.1 1440 < th dose independent rect. 5 1
557 37.54 atmosphere 995.0 1440 > th dose independent rect. 13 14
563 37.54 radiation 40.0 720 < th dose independent rect. 20 16
571 37.54 precipitation 0.1 1440 < th dose dependent rect. 5 1
586 37.55 precipitation 0.1 1440 < th dose independent rect. 2 5
588 37.55 precipitation 0.1 1440 < th dose independent rect. 2 7
601 37.55 precipitation 0.1 1440 < th dose dependent rect. 2 5
604 37.55 precipitation 0.1 1440 < th dose dependent rect. 2 7
716 37.58 radiation 40.0 720 > th dose dependent rect. 8 4
762 37.59 radiation 40.0 720 < th dose independent rect. 18 18
779 37.60 precipitation 0.1 1440 > th dose independent rect. 2 5
783 37.60 wind 7.0 1440 < th dose independent rect. 21 9
816 37.61 precipitation 0.1 1440 > th dose independent rect. 12 1
829 37.61 precipitation 0.1 1440 > th dose independent rect. 2 7
836 37.61 humidity 60.0 270 > th dose independent rect. 11 11
858 37.61 precipitation 0.1 1440 > th dose dependent rect. 12 1
895 37.62 temperature 15.0 1440 > th dose independent rect. 8 2
899 37.62 atmosphere 995.0 4320 < th dose independent rect. 14 5
946 37.62 precipitation 0.1 1440 > th dose dependent rect. 2 5
950 37.62 temperature 20.0 1440 < th dose dependent rect. 11 6
966 37.63 atmosphere 1010.0 720 < th dose independent rect. 10 5
974 37.63 atmosphere 1005.0 90 < th dose independent rect. 9 9
981 37.63 temperature 15.0 720 > th dose independent rect. 17 15