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Os03g0217000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Inhibin beta B chain precursor (Activin beta-B chain).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.63 (0.0229) R2 : 0.853
β1 : 0.839 (0.0842) R2dD : 0.0335 R2D : 0.0112
β2 : 2.22 (0.076) R2dC : 0.443 R2C : 0.702
β3 : -1.2 (0.0822) R2dE : 0.112 R2E : 0.379
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.349 (0.049) R2dN8 : 0.0217 R2N8 : 0.00309
σ : 0.429
deviance : 84.81
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C
peak time of C : 17.5
E
wheather : wind
threshold : 11.88
memory length : 12
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.98
open length of G : 3.95

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.88 0.412 8.63 0.78 2.18 -1.31 -2.19 -1.14 0.343 17.6 8.225 11 2 3.97
78.11 0.412 8.63 0.858 2.17 -1.31 -1.81 -- 0.354 17.6 10.38 11 1.99 3.95
84.69 0.429 8.63 0.779 2.19 -1.23 -- 0.446 0.354 17.5 12.61 11 2 3.93
84.81 0.429 8.63 0.839 2.22 -1.2 -- -- 0.349 17.5 11.88 12 1.98 3.95
157.67 0.585 8.53 0.851 -- -2.87 -- 0.381 0.422 -- 16.5 325 0.0167 5.12
119.7 0.513 8.63 0.766 2.91 -- -1.19 -- 0.374 17.3 -- -- -- --
123.22 0.52 8.63 0.768 2.9 -- -- -- 0.369 17.3 -- -- -- --
156.95 0.583 8.56 0.863 -- -2.94 -- -- 0.464 -- 24.53 320 0.0097 5.32
102.95 0.473 8.64 -- 2.28 -1.04 -- -- 0.271 17.5 14.42 84 1.93 3.62
562.64 1.11 8.6 0.669 -- -- -- -- 0.296 -- -- -- -- --
138.78 0.551 8.65 -- 2.89 -- -- -- 0.283 17.3 -- -- -- --
176.72 0.619 8.58 -- -- -2.85 -- -- 0.375 -- 42.75 317 0.00214 5.37
574.44 1.12 8.61 -- -- -- -- -- 0.222 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.82 wind 7.0 10 < th dose dependent rect. 2 4
14 79.04 humidity 50.0 10 > th dose dependent rect. 2 4
17 79.25 temperature 25.0 90 < th dose independent rect. 3 2
19 79.33 wind 5.0 10 < th dose independent rect. 2 4
20 79.41 radiation 10.0 10 < th dose independent rect. 2 4
21 79.45 precipitation 0.1 10 < th dose independent rect. 6 20
22 79.45 precipitation 0.1 10 < th dose dependent rect. 6 20
27 79.68 temperature 10.0 10 > th dose independent rect. 2 4
29 79.68 temperature 30.0 10 < th dose independent rect. 2 4
30 79.68 humidity 50.0 10 > th dose independent rect. 2 4
33 79.68 atmosphere 995.0 10 > th dose independent rect. 2 4
34 79.68 atmosphere 1010.0 10 < th dose independent rect. 2 4
39 79.68 temperature 10.0 10 > th dose independent rect. 6 20
44 79.98 precipitation 0.1 10 < th dose independent rect. 2 4
45 79.98 precipitation 0.1 10 < th dose dependent rect. 2 4
49 80.15 temperature 10.0 10 > th dose dependent rect. 2 4
57 80.43 humidity 50.0 270 > th dose dependent rect. 1 2
58 80.46 wind 9.0 10 < th dose independent rect. 6 20
81 80.65 radiation 40.0 10 < th dose dependent rect. 2 4
106 81.17 wind 9.0 1440 < th dose independent rect. 3 4
107 81.17 temperature 10.0 1440 > th dose independent rect. 3 4
110 81.17 temperature 30.0 1440 < th dose independent rect. 3 4
114 81.17 humidity 50.0 1440 > th dose independent rect. 3 4
119 81.17 atmosphere 995.0 1440 > th dose independent rect. 3 4
120 81.17 radiation 40.0 1440 < th dose independent rect. 3 4
124 81.17 temperature 10.0 1440 > th dose independent rect. 7 20
141 81.24 wind 1.0 270 > th dose independent rect. 1 2
143 81.28 atmosphere 995.0 10 > th dose independent rect. 6 20
148 81.33 wind 1.0 270 > th dose independent rect. 4 20
158 81.42 wind 5.0 270 < th dose independent rect. 1 2
177 81.52 precipitation 0.1 270 < th dose independent rect. 1 2
178 81.52 precipitation 0.1 270 < th dose dependent rect. 1 2
181 81.69 temperature 10.0 270 > th dose independent rect. 1 2
183 81.69 temperature 30.0 270 < th dose independent rect. 1 2
184 81.69 humidity 50.0 270 > th dose independent rect. 1 2
187 81.69 atmosphere 995.0 270 > th dose independent rect. 1 2
188 81.69 atmosphere 1010.0 270 < th dose independent rect. 1 2
190 81.69 radiation 1.0 270 < th dose independent rect. 1 2
195 81.69 temperature 10.0 270 > th dose independent rect. 3 22
196 81.69 radiation 1.0 270 < th dose dependent rect. 1 2
224 82.07 atmosphere 1015.0 10 < th dose independent rect. 6 20
251 82.41 radiation 40.0 90 < th dose independent rect. 6 20
261 82.65 precipitation 0.1 270 < th dose independent rect. 4 21
262 82.65 precipitation 0.1 270 < th dose dependent rect. 4 21
295 82.87 atmosphere 1015.0 1440 < th dose independent rect. 3 4
407 83.60 wind 9.0 270 < th dose independent rect. 3 22
411 83.64 humidity 90.0 90 > th dose independent rect. 3 2
420 83.85 temperature 10.0 270 > th dose dependent rect. 1 2
457 84.16 atmosphere 995.0 10 > th dose dependent rect. 2 4
469 84.37 radiation 40.0 10 < th dose dependent rect. 6 20
485 84.77 atmosphere 1015.0 90 < th dose dependent rect. 3 2
487 84.79 radiation 40.0 90 < th dose dependent rect. 6 20
498 84.93 temperature 30.0 90 < th dose dependent rect. 3 2
518 85.24 temperature 30.0 90 < th dose independent rect. 6 20
640 86.07 atmosphere 1015.0 10 < th dose dependent rect. 2 4
781 87.76 atmosphere 1015.0 270 < th dose dependent rect. 1 2
789 87.82 wind 1.0 10 > th dose independent rect. 6 20
876 88.33 wind 9.0 30 < th dose dependent rect. 6 20
922 88.50 humidity 50.0 10 > th dose independent rect. 6 20
955 88.68 humidity 50.0 1440 < th dose independent rect. 16 1
963 88.72 humidity 50.0 1440 < th dose dependent rect. 16 1