Os03g0214600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26S proteasome subunit-like protein (26S proteasome subunit RPN9a).
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Os03g0214600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 26S proteasome subunit-like protein (26S proteasome subunit RPN9a).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.6 | 0.16 | 11.6 | 1.01 | 0.298 | 0.741 | -0.149 | -0.781 | 0.226 | 15.4 | 29.04 | 95 | -- | -- |
| 12.39 | 0.164 | 11.6 | 0.894 | 0.278 | 0.742 | -0.0938 | -- | 0.184 | 15.3 | 28.07 | 90 | -- | -- |
| 11.65 | 0.159 | 11.6 | 0.985 | 0.301 | 0.748 | -- | -0.664 | 0.221 | 15.4 | 29.03 | 97 | -- | -- |
| 12.2 | 0.163 | 11.6 | 0.881 | 0.283 | 0.753 | -- | -- | 0.197 | 15.8 | 27.63 | 156 | -- | -- |
| 12.5 | 0.165 | 11.6 | 1.02 | -- | 0.712 | -- | -0.617 | 0.213 | -- | 24.94 | 1411 | -- | -- |
| 20.08 | 0.21 | 11.7 | 0.682 | 0.0735 | -- | 0.00493 | -- | 0.036 | 16.9 | -- | -- | -- | -- |
| 20.08 | 0.21 | 11.7 | 0.682 | 0.0735 | -- | -- | -- | 0.036 | 16.9 | -- | -- | -- | -- |
| 12.94 | 0.168 | 11.6 | 0.897 | -- | 0.751 | -- | -- | 0.169 | -- | 23.72 | 1405 | -- | -- |
| 30.1 | 0.257 | 11.7 | -- | 0.178 | 0.459 | -- | -- | 0.0146 | 15.2 | 45.47 | 40 | -- | -- |
| 20.36 | 0.211 | 11.7 | 0.679 | -- | -- | -- | -- | 0.0341 | -- | -- | -- | -- | -- |
| 32.34 | 0.266 | 11.7 | -- | 0.0615 | -- | -- | -- | -0.04 | 17.3 | -- | -- | -- | -- |
| 30.87 | 0.26 | 11.7 | -- | -- | 0.318 | -- | -- | -0.00162 | -- | 23.72 | 1405 | -- | -- |
| 32.53 | 0.266 | 11.7 | -- | -- | -- | -- | -- | -0.0413 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.37 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 11.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 4 | 11.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 6 | 11.67 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 8 | 11.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 10 | 11.79 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 11 | 11.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 18 | 11.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 20 | 11.87 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 21 | 11.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 29 | 11.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 30 | 11.89 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 50 | 11.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 59 | 12.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 102 | 12.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 124 | 12.26 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 125 | 12.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 126 | 12.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 133 | 12.26 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 135 | 12.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 150 | 12.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 180 | 12.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 201 | 12.30 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 206 | 12.31 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 238 | 12.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 242 | 12.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 262 | 12.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 381 | 12.43 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 430 | 12.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 492 | 12.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 566 | 12.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 713 | 12.58 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 917 | 12.65 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 986 | 12.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |