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Os03g0213500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0178) R2 : 0.0164
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.103 (0.0376) R2dN8 : 0.0211 R2N8 : 0.0164
σ : 0.336
deviance : 51.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.08 0.297 11.8 -0.465 0.299 -0.238 0.0519 0.489 -0.167 21.5 20 89 -- --
40.34 0.298 11.8 -0.476 0.322 -0.238 0.416 -- -0.149 21.7 19.54 103 -- --
40.03 0.295 11.8 -0.469 0.301 -0.241 -- 0.499 -0.165 21.5 19.99 79 -- --
40.95 0.3 11.8 -0.49 0.311 -0.217 -- -- -0.149 21.3 19.54 103 -- --
44.09 0.309 11.8 -0.466 -- -0.0857 -- 0.886 -0.164 -- 37.5 132 -- --
42.84 0.307 11.8 -0.477 0.222 -- 0.2 -- -0.154 19.5 -- -- -- --
42.91 0.307 11.8 -0.481 0.225 -- -- -- -0.153 19.1 -- -- -- --
44.84 0.312 11.8 -0.476 -- -0.252 -- -- -0.157 -- 59.89 260 -- --
47.26 0.322 11.8 -- 0.304 -0.205 -- -- -0.0952 21.1 19.54 103 -- --
45.58 0.315 11.8 -0.486 -- -- -- -- -0.157 -- -- -- -- --
49.01 0.327 11.8 -- 0.23 -- -- -- -0.0997 19 -- -- -- --
48.45 0.324 11.8 -- -- -0.495 -- -- -0.0837 -- 59.97 4601 -- --
51.8 0.336 11.8 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.54 temperature 10.0 90 > th dose dependent rect. 21 7
2 34.71 temperature 10.0 10 > th dose dependent rect. 21 8
4 34.92 humidity 60.0 10 > th dose dependent rect. 5 4
8 35.02 humidity 60.0 90 > th dose dependent rect. 4 5
20 35.20 atmosphere 1000.0 270 > th dose independent rect. 4 2
21 35.20 atmosphere 1000.0 10 > th dose independent rect. 5 3
24 35.23 temperature 15.0 10 > th dose dependent rect. 23 6
25 35.24 radiation 40.0 10 < th dose dependent rect. 5 4
27 35.26 temperature 10.0 270 > th dose dependent rect. 4 2
28 35.26 humidity 80.0 270 > th dose dependent rect. 4 2
31 35.28 temperature 15.0 90 > th dose independent rect. 4 17
45 35.38 radiation 1.0 10 < th dose dependent sin 10 NA
53 35.42 humidity 70.0 10 > th dose independent rect. 5 3
54 35.42 atmosphere 1000.0 90 > th dose independent rect. 4 5
55 35.44 precipitation 0.1 270 < th dose independent rect. 6 22
56 35.44 precipitation 0.1 270 < th dose dependent rect. 6 22
63 35.49 wind 1.0 270 > th dose independent rect. 6 8
64 35.49 precipitation 0.1 10 < th dose independent rect. 8 21
65 35.49 precipitation 0.1 10 < th dose dependent rect. 8 21
66 35.51 temperature 20.0 270 > th dose independent rect. 4 2
67 35.51 humidity 80.0 90 > th dose independent rect. 4 5
70 35.52 radiation 10.0 270 < th dose independent rect. 4 2
72 35.53 radiation 20.0 90 < th dose independent rect. 4 5
75 35.54 atmosphere 1010.0 270 < th dose independent rect. 4 2
77 35.54 atmosphere 1010.0 90 < th dose independent rect. 4 5
79 35.55 radiation 30.0 10 < th dose independent rect. 5 3
87 35.59 wind 9.0 270 < th dose independent rect. 6 22
93 35.61 wind 9.0 270 < th dose independent rect. 4 2
94 35.61 temperature 10.0 270 > th dose independent rect. 4 2
96 35.61 temperature 30.0 270 < th dose independent rect. 4 2
97 35.61 humidity 50.0 270 > th dose independent rect. 4 2
106 35.61 temperature 10.0 270 > th dose independent rect. 6 22
107 35.61 radiation 30.0 270 < th dose dependent rect. 4 2
110 35.62 atmosphere 1015.0 10 < th dose independent rect. 8 21
118 35.64 wind 7.0 10 < th dose independent rect. 5 3
120 35.64 temperature 10.0 10 > th dose independent rect. 5 3
122 35.64 temperature 30.0 10 < th dose independent rect. 5 3
123 35.64 humidity 50.0 10 > th dose independent rect. 5 3
126 35.64 atmosphere 1015.0 10 < th dose independent rect. 5 3
127 35.64 temperature 10.0 10 > th dose independent rect. 8 21
133 35.66 precipitation 0.1 90 < th dose independent rect. 9 19
137 35.66 precipitation 0.1 90 < th dose dependent rect. 9 19
138 35.67 precipitation 0.1 270 < th dose independent rect. 4 2
142 35.67 precipitation 0.1 270 < th dose dependent rect. 4 2
146 35.68 radiation 40.0 90 < th dose independent rect. 4 5
148 35.69 precipitation 0.1 10 < th dose independent rect. 5 3
150 35.69 precipitation 0.1 10 < th dose dependent rect. 5 3
160 35.73 atmosphere 1015.0 90 < th dose independent rect. 9 19
162 35.74 humidity 60.0 90 > th dose independent rect. 4 5
164 35.75 temperature 15.0 270 > th dose independent rect. 2 16
166 35.75 wind 9.0 10 < th dose dependent rect. 5 3
167 35.75 temperature 10.0 10 > th dose dependent rect. 5 3
168 35.75 wind 9.0 90 < th dose dependent rect. 4 5
170 35.76 wind 9.0 90 < th dose independent rect. 4 5
171 35.76 temperature 10.0 90 > th dose independent rect. 4 5
176 35.76 temperature 10.0 90 > th dose independent rect. 9 19
188 35.78 atmosphere 1010.0 90 < th dose independent rect. 4 17
191 35.79 precipitation 0.1 90 < th dose independent rect. 4 5
192 35.79 atmosphere 1015.0 90 < th dose independent rect. 7 21
193 35.79 precipitation 0.1 90 < th dose dependent rect. 4 5
219 35.82 wind 9.0 270 < th dose dependent rect. 4 2
224 35.84 wind 9.0 90 < th dose independent rect. 9 19
229 35.85 wind 9.0 10 < th dose independent rect. 8 21
236 35.86 atmosphere 995.0 10 > th dose independent rect. 8 21
291 35.92 radiation 40.0 270 < th dose dependent rect. 15 16
294 35.93 temperature 20.0 90 > th dose independent rect. 21 7
301 35.94 atmosphere 1010.0 270 < th dose independent rect. 2 5
308 35.95 atmosphere 1015.0 90 < th dose independent rect. 21 7
313 35.96 atmosphere 1000.0 270 > th dose independent rect. 14 17
314 35.96 atmosphere 995.0 90 > th dose independent rect. 9 19
339 36.01 precipitation 0.1 10 < th dose independent rect. 21 8
340 36.01 precipitation 0.1 10 < th dose dependent rect. 21 8
350 36.02 atmosphere 1015.0 10 < th dose independent rect. 21 8
355 36.02 radiation 1.0 10 < th dose dependent rect. 21 8
359 36.03 temperature 10.0 270 > th dose independent rect. 7 7
360 36.03 atmosphere 995.0 270 > th dose independent rect. 7 7
361 36.03 atmosphere 1015.0 270 < th dose independent rect. 7 7
362 36.03 temperature 10.0 270 > th dose independent rect. 14 17
379 36.06 precipitation 0.1 90 < th dose independent rect. 21 7
381 36.06 atmosphere 995.0 10 > th dose dependent rect. 5 3
384 36.06 precipitation 0.1 90 < th dose dependent rect. 21 7
391 36.07 wind 9.0 10 < th dose independent rect. 21 8
392 36.07 temperature 10.0 10 > th dose independent rect. 21 8
393 36.07 temperature 30.0 10 < th dose independent rect. 21 8
394 36.07 humidity 50.0 10 > th dose independent rect. 21 8
397 36.07 atmosphere 995.0 10 > th dose independent rect. 21 8
398 36.07 radiation 1.0 10 < th dose independent rect. 21 8
406 36.07 temperature 10.0 10 > th dose independent rect. 5 16
408 36.07 atmosphere 1015.0 10 < th dose independent rect. 5 16
411 36.08 radiation 20.0 90 < th dose independent rect. 4 7
413 36.09 radiation 20.0 270 < th dose independent rect. 2 5
414 36.09 temperature 10.0 90 > th dose independent rect. 21 7
415 36.09 temperature 30.0 90 < th dose independent rect. 21 7
416 36.09 humidity 50.0 90 > th dose independent rect. 21 7
419 36.09 atmosphere 995.0 90 > th dose independent rect. 21 7
420 36.09 radiation 1.0 90 < th dose independent rect. 21 7
429 36.09 atmosphere 995.0 90 > th dose independent rect. 7 21
433 36.09 radiation 1.0 90 < th dose dependent rect. 21 7
452 36.10 precipitation 0.1 270 < th dose independent rect. 7 7
457 36.10 precipitation 0.1 270 < th dose dependent rect. 7 7
461 36.11 wind 9.0 90 < th dose independent rect. 21 7
465 36.12 humidity 70.0 270 > th dose independent rect. 2 5
470 36.13 humidity 50.0 270 > th dose independent rect. 7 7
473 36.13 radiation 30.0 270 < th dose independent rect. 15 15
480 36.14 wind 9.0 10 < th dose independent rect. 5 16
498 36.16 radiation 1.0 10 > th dose independent sin 10 NA
502 36.16 atmosphere 1000.0 90 > th dose independent rect. 16 16
510 36.17 wind 9.0 270 < th dose independent rect. 2 5
511 36.17 temperature 10.0 270 > th dose independent rect. 2 5
513 36.17 temperature 30.0 270 < th dose independent rect. 2 5
514 36.17 humidity 50.0 270 > th dose independent rect. 2 5
520 36.17 wind 9.0 90 < th dose independent rect. 4 17
528 36.18 precipitation 0.1 10 < th dose independent rect. 5 16
532 36.18 precipitation 0.1 10 < th dose dependent rect. 5 16
537 36.19 atmosphere 1000.0 10 > th dose independent rect. 16 16
542 36.20 wind 9.0 270 < th dose independent rect. 7 7
555 36.21 atmosphere 995.0 270 > th dose dependent rect. 4 2
558 36.21 atmosphere 995.0 90 > th dose dependent rect. 4 4
582 36.24 wind 3.0 90 < th dose independent rect. 4 5
606 36.26 precipitation 0.1 270 < th dose independent rect. 2 5
612 36.26 precipitation 0.1 270 < th dose dependent rect. 2 5
628 36.28 humidity 50.0 270 > th dose independent rect. 6 21
646 36.30 wind 9.0 270 < th dose independent rect. 14 17
652 36.30 atmosphere 1015.0 90 < th dose dependent rect. 4 3
664 36.32 precipitation 0.1 90 < th dose independent rect. 4 17
667 36.32 precipitation 0.1 90 < th dose dependent rect. 4 17
689 36.34 precipitation 0.1 270 < th dose independent rect. 18 8
692 36.34 precipitation 0.1 270 < th dose dependent rect. 18 8
709 36.35 atmosphere 995.0 10 > th dose independent rect. 5 16
726 36.37 temperature 20.0 270 > th dose independent rect. 21 4
735 36.38 radiation 1.0 10 < th dose independent sin 10 NA
737 36.38 wind 9.0 4320 < th dose independent rect. 5 4
779 36.41 atmosphere 995.0 90 > th dose independent rect. 4 17
780 36.41 precipitation 0.1 270 < th dose independent rect. 14 17
785 36.41 precipitation 0.1 270 < th dose dependent rect. 14 17
801 36.42 radiation 10.0 270 < th dose independent rect. 18 8
852 36.44 wind 9.0 270 < th dose independent rect. 18 8
855 36.44 humidity 50.0 270 > th dose independent rect. 7 19
866 36.45 temperature 10.0 270 > th dose independent rect. 18 8
867 36.45 humidity 50.0 270 > th dose independent rect. 18 8
873 36.45 atmosphere 1015.0 270 < th dose independent rect. 2 16
909 36.46 radiation 10.0 270 < th dose dependent rect. 18 8
941 36.48 humidity 50.0 10 > th dose independent rect. 5 16
942 36.48 humidity 50.0 270 > th dose independent rect. 14 17
951 36.49 atmosphere 1015.0 270 < th dose independent rect. 18 8
972 36.51 atmosphere 995.0 270 > th dose independent rect. 18 8
986 36.52 humidity 50.0 90 > th dose independent rect. 9 19
989 36.52 atmosphere 1015.0 90 < th dose dependent rect. 4 5
993 36.52 wind 9.0 90 < th dose dependent rect. 21 7