Os03g0212200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, typical subtype containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0212200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Leucine-rich repeat, typical subtype containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.3 | 0.473 | 6.96 | -0.644 | 0.575 | 1.86 | -1.07 | -0.95 | 0.0449 | 11.2 | 9.838 | 96 | -- | -- |
| 101.93 | 0.47 | 6.94 | -0.506 | 0.579 | 1.85 | -1.18 | -- | 0.0894 | 11.1 | 8.58 | 97 | -- | -- |
| 105.27 | 0.482 | 6.98 | -0.784 | 0.502 | 1.83 | -- | -1.93 | 0.0129 | 12 | 9.098 | 95 | -- | -- |
| 108.29 | 0.485 | 6.94 | -0.541 | 0.592 | 1.79 | -- | -- | 0.0867 | 11.4 | 10.04 | 99 | -- | -- |
| 117.09 | 0.507 | 7.01 | -0.894 | -- | 2.37 | -- | -1.95 | -0.0633 | -- | 14.39 | 9 | -- | -- |
| 135.96 | 0.547 | 6.89 | -0.14 | 0.962 | -- | -0.944 | -- | 0.342 | 13 | -- | -- | -- | -- |
| 139.62 | 0.553 | 6.89 | -0.173 | 0.966 | -- | -- | -- | 0.338 | 13.1 | -- | -- | -- | -- |
| 120.26 | 0.513 | 6.97 | -0.628 | -- | 2.33 | -- | -- | 0.0104 | -- | 14.39 | 9 | -- | -- |
| 114.88 | 0.502 | 6.93 | -- | 0.566 | 1.55 | -- | -- | 0.172 | 12.3 | 13.58 | 117 | -- | -- |
| 197.43 | 0.657 | 6.9 | -0.21 | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
| 140.41 | 0.554 | 6.88 | -- | 0.969 | -- | -- | -- | 0.357 | 13.1 | -- | -- | -- | -- |
| 129.94 | 0.531 | 6.95 | -- | -- | 2.12 | -- | -- | 0.1 | -- | 14.5 | 2 | -- | -- |
| 198.6 | 0.658 | 6.9 | -- | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 7 | 98.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 14 | 99.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 23 | 99.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 30 | 99.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 46 | 100.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 84 | 100.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 101 | 101.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 18 |
| 110 | 101.27 | temperature | 15 | 720 | > th | dose dependent | sin | 2 | NA |
| 119 | 101.33 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 150 | 101.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 151 | 101.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 167 | 101.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 180 | 101.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 188 | 102.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 203 | 102.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 228 | 102.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 230 | 102.32 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 263 | 102.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 264 | 102.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 269 | 102.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 295 | 102.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 355 | 103.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 364 | 103.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 385 | 103.24 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 496 | 103.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 498 | 103.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 580 | 103.91 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 693 | 104.09 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 700 | 104.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 709 | 104.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 710 | 104.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 714 | 104.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 728 | 104.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 929 | 104.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |