Os03g0211500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0211500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.48 | 0.543 | 5.36 | -0.802 | 0.282 | -0.854 | 0.911 | 3.11 | -0.513 | 23.3 | 24.87 | 1338 | -- | -- |
| 144.49 | 0.56 | 5.3 | 0.0552 | 0.319 | -0.635 | 0.925 | -- | -0.284 | 23.6 | 23.14 | 1545 | -- | -- |
| 136.56 | 0.544 | 5.35 | -0.755 | 0.304 | -0.813 | -- | 2.89 | -0.474 | 0.131 | 24.8 | 1386 | -- | -- |
| 144.79 | 0.56 | 5.26 | 0.0984 | 0.35 | -0.568 | -- | -- | -0.227 | 0.746 | 23.19 | 1455 | -- | -- |
| 141.69 | 0.554 | 5.36 | -0.752 | -- | -0.883 | -- | 2.91 | -0.511 | -- | 25.1 | 1319 | -- | -- |
| 157.31 | 0.588 | 5.21 | 0.345 | 0.373 | -- | 0.603 | -- | 0.0125 | 0.276 | -- | -- | -- | -- |
| 158.67 | 0.59 | 5.21 | 0.32 | 0.377 | -- | -- | -- | 0.00819 | 0.929 | -- | -- | -- | -- |
| 149.21 | 0.569 | 5.25 | 0.112 | -- | -0.725 | -- | -- | -0.232 | -- | 25 | 1084 | -- | -- |
| 145.02 | 0.561 | 5.26 | -- | 0.352 | -0.589 | -- | -- | -0.247 | 0.763 | 23.14 | 1456 | -- | -- |
| 167.54 | 0.605 | 5.2 | 0.334 | -- | -- | -- | -- | 0.0154 | -- | -- | -- | -- | -- |
| 161.37 | 0.594 | 5.21 | -- | 0.382 | -- | -- | -- | -0.0274 | 0.965 | -- | -- | -- | -- |
| 149.5 | 0.569 | 5.26 | -- | -- | -0.74 | -- | -- | -0.258 | -- | 25.1 | 1074 | -- | -- |
| 170.48 | 0.609 | 5.21 | -- | -- | -- | -- | -- | -0.0217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.06 | radiation | 10 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 2 | 131.61 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 22 | 131.95 | radiation | 10 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 23 | 131.96 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 26 | 132.02 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 46 | 132.15 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 61 | 132.22 | radiation | 20 | 43200 | < th | dose dependent | sin | 8 | NA |
| 228 | 132.63 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 288 | 132.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 296 | 132.74 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 322 | 132.78 | radiation | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 342 | 132.81 | radiation | 10 | 43200 | < th | dose independent | sin | 2 | NA |
| 458 | 132.98 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 473 | 132.98 | radiation | 1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 489 | 133.00 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 606 | 133.11 | radiation | 30 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 671 | 133.20 | radiation | 20 | 43200 | > th | dose independent | sin | 9 | NA |
| 859 | 133.38 | radiation | 1 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 863 | 133.39 | radiation | 1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 923 | 133.44 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 936 | 133.47 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 937 | 133.47 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 982 | 133.47 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 23 |