Os03g0211200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1677, Oryza sativa family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0211200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1677, Oryza sativa family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 444.11 | 0.99 | 3.48 | 2.27 | 0.0686 | -1.63 | 0.457 | 8.01 | -0.0689 | 2.43 | 29.2 | 1463 | -- | -- |
| 447.65 | 0.985 | 3.67 | 0.739 | 0.113 | -0.759 | 0.385 | -- | -0.206 | 1.74 | 30.08 | 1472 | -- | -- |
| 444.79 | 0.982 | 3.48 | 2.27 | 0.0777 | -1.61 | -- | 7.96 | -0.0705 | 0.66 | 29.2 | 1447 | -- | -- |
| 448.37 | 0.986 | 3.67 | 0.723 | 0.0873 | -0.732 | -- | -- | -0.186 | 1.4 | 30.03 | 1468 | -- | -- |
| 445.14 | 0.983 | 3.48 | 2.29 | -- | -1.64 | -- | 8.21 | -0.0626 | -- | 29.19 | 1466 | -- | -- |
| 472.88 | 1.02 | 3.64 | 0.532 | 0.00359 | -- | 0.398 | -- | -0.0409 | 3.4 | -- | -- | -- | -- |
| 473.38 | 1.02 | 3.64 | 0.525 | 0.00809 | -- | -- | -- | -0.0432 | 23.9 | -- | -- | -- | -- |
| 448.79 | 0.987 | 3.67 | 0.724 | -- | -0.731 | -- | -- | -0.184 | -- | 30.1 | 1474 | -- | -- |
| 461.58 | 1 | 3.68 | -- | 0.0668 | -0.603 | -- | -- | -0.232 | 1.8 | 30.4 | 1451 | -- | -- |
| 473.38 | 1.02 | 3.64 | 0.525 | -- | -- | -- | -- | -0.0431 | -- | -- | -- | -- | -- |
| 480.64 | 1.03 | 3.65 | -- | 0.0167 | -- | -- | -- | -0.102 | 1.8 | -- | -- | -- | -- |
| 461.98 | 1 | 3.68 | -- | -- | -0.614 | -- | -- | -0.239 | -- | 30.4 | 1469 | -- | -- |
| 480.65 | 1.02 | 3.65 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 432.76 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 2 | 433.71 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 20 |
| 5 | 433.87 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 7 | 433.91 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 8 | 433.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 10 | 434.00 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 12 |
| 16 | 434.07 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 22 |
| 21 | 434.12 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 20 |
| 24 | 434.15 | wind | 7 | 10 | > th | dose independent | rect. | 13 | 1 |
| 25 | 434.16 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 41 | 434.29 | wind | 7 | 90 | > th | dose independent | rect. | 13 | 1 |
| 45 | 434.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 20 |
| 48 | 434.34 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 52 | 434.38 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 102 | 434.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 104 | 434.68 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 107 | 434.70 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 21 |
| 110 | 434.71 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 112 | 434.71 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 16 |
| 119 | 434.74 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 153 | 434.87 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 157 | 434.87 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 162 | 434.89 | wind | 7 | 43200 | < th | dose independent | sin | 21 | NA |
| 177 | 434.95 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 181 | 434.97 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 182 | 434.97 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 191 | 434.99 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 202 | 435.01 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 21 |
| 222 | 435.08 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 229 | 435.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 230 | 435.09 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 315 | 435.27 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 320 | 435.27 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 356 | 435.35 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 394 | 435.41 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 16 |
| 403 | 435.42 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 419 | 435.46 | wind | 7 | 43200 | > th | dose independent | sin | 21 | NA |
| 441 | 435.50 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 447 | 435.51 | wind | 7 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 465 | 435.54 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 513 | 435.62 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 633 | 435.86 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 738 | 436.16 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 796 | 436.31 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 880 | 436.53 | humidity | 90 | 43200 | < th | dose independent | sin | 8 | NA |
| 890 | 436.54 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 907 | 436.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 913 | 436.61 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 927 | 436.65 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 942 | 436.70 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 3 |