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Os03g0210600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0201) R2 : 0.567
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.14 (0.0491) R2dC : 0.514 R2C : 0.508
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.295 (0.0424) R2dN8 : 0.0594 R2N8 : 0.0527
σ : 0.38
deviance : 65.97
__
_____
C
peak time of C : 14.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.43 0.334 10.3 -0.427 1.09 -0.62 0.636 0.636 -0.406 14.1 32.77 4600 -- --
50.71 0.332 10.3 -0.379 1.1 -0.614 0.624 -- -0.405 14 34.8 4616 -- --
51.95 0.336 10.3 -0.415 1.1 -0.6 -- 0.556 -0.405 14.1 32.65 4599 -- --
52.04 0.336 10.3 -0.344 1.1 -0.624 -- -- -0.402 14.1 34.78 4597 -- --
111.03 0.493 10.3 -0.485 -- -0.748 -- 0.0416 -0.391 -- 32.65 4599 -- --
60.75 0.365 10.3 -0.413 1.13 -- 0.527 -- -0.342 14.1 -- -- -- --
61.8 0.368 10.3 -0.398 1.14 -- -- -- -0.339 14.1 -- -- -- --
111.04 0.493 10.3 -0.487 -- -0.747 -- -- -0.391 -- 32.65 4599 -- --
54.92 0.345 10.3 -- 1.12 -0.679 -- -- -0.374 14.1 34.83 4599 -- --
139.04 0.551 10.3 -0.445 -- -- -- -- -0.366 -- -- -- -- --
65.97 0.38 10.2 -- 1.14 -- -- -- -0.295 14.1 -- -- -- --
117.28 0.506 10.3 -- -- -0.733 -- -- -0.336 -- 32.65 4599 -- --
144.27 0.561 10.3 -- -- -- -- -- -0.317 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.70 radiation 30 270 < th dose dependent rect. 7 10
2 48.71 radiation 40 270 < th dose dependent rect. 6 22
13 49.27 humidity 60 270 > th dose dependent rect. 7 12
18 49.39 humidity 70 270 > th dose independent rect. 7 12
33 49.69 temperature 15 270 > th dose dependent rect. 3 13
39 49.91 radiation 20 270 < th dose independent rect. 6 22
57 50.19 radiation 20 270 < th dose independent rect. 7 10
61 50.24 temperature 25 270 > th dose dependent rect. 4 12
75 50.33 radiation 40 720 < th dose dependent rect. 7 4
83 50.42 radiation 20 720 < th dose independent rect. 9 1
87 50.46 radiation 20 270 < th dose independent rect. 7 12
92 50.54 temperature 25 270 > th dose dependent sin 2 NA
107 50.65 radiation 1 270 > th dose dependent rect. 11 23
117 50.72 radiation 20 720 < th dose independent rect. 7 4
121 50.74 humidity 70 270 > th dose independent rect. 6 23
122 50.74 radiation 40 270 < th dose independent rect. 6 23
124 50.75 radiation 40 720 < th dose dependent rect. 24 11
141 50.86 temperature 30 270 < th dose independent rect. 7 12
143 50.86 temperature 25 4320 > th dose dependent rect. 18 3
147 50.89 radiation 40 720 < th dose dependent rect. 9 1
157 50.91 temperature 15 270 > th dose dependent sin 1 NA
166 50.93 temperature 30 270 < th dose dependent rect. 7 12
168 50.95 radiation 40 4320 < th dose independent sin 9 NA
214 51.11 radiation 40 4320 < th dose independent rect. 15 20
219 51.11 radiation 40 270 < th dose dependent rect. 13 23
220 51.12 radiation 1 270 > th dose dependent sin 21 NA
221 51.12 humidity 80 720 < th dose dependent rect. 12 1
223 51.13 radiation 40 720 < th dose independent rect. 15 21
228 51.14 humidity 70 270 > th dose independent sin 23 NA
234 51.15 radiation 40 4320 < th dose dependent rect. 8 2
251 51.18 radiation 20 4320 < th dose independent rect. 15 1
252 51.18 radiation 40 720 < th dose independent rect. 7 5
259 51.20 radiation 40 720 < th dose independent rect. 24 10
261 51.20 radiation 1 270 > th dose dependent no NA NA
264 51.20 radiation 1 270 > th dose dependent rect. 5 14
321 51.22 humidity 70 270 < th dose independent rect. 9 9
323 51.22 radiation 40 4320 < th dose independent rect. 19 18
339 51.23 radiation 40 4320 < th dose independent rect. 7 6
340 51.23 radiation 40 4320 < th dose independent rect. 4 9
344 51.23 radiation 40 4320 < th dose independent rect. 21 16
365 51.26 temperature 25 10 > th dose dependent rect. 5 15
367 51.26 radiation 40 270 < th dose dependent rect. 16 23
384 51.28 radiation 40 4320 < th dose dependent rect. 15 20
433 51.31 radiation 1 4320 > th dose dependent rect. 8 2
475 51.33 radiation 40 270 < th dose dependent no NA NA
491 51.35 radiation 20 720 < th dose independent rect. 24 11
492 51.35 temperature 25 90 > th dose dependent sin 23 NA
493 51.35 radiation 40 270 < th dose dependent sin 22 NA
498 51.35 radiation 1 4320 > th dose dependent rect. 15 19
511 51.36 humidity 80 270 < th dose dependent rect. 19 22
515 51.37 humidity 80 270 < th dose dependent rect. 9 8
526 51.39 radiation 40 270 < th dose dependent rect. 18 23
545 51.41 radiation 20 270 > th dose independent rect. 9 23
577 51.45 radiation 30 4320 < th dose independent rect. 11 23
584 51.46 humidity 70 270 < th dose independent rect. 9 22
603 51.47 humidity 70 270 > th dose independent rect. 13 23
609 51.48 radiation 20 270 > th dose independent sin 22 NA
627 51.48 humidity 90 10 < th dose dependent rect. 12 8
657 51.51 humidity 70 270 < th dose independent sin 23 NA
661 51.51 radiation 30 4320 < th dose independent rect. 7 15
664 51.51 radiation 30 4320 < th dose independent rect. 7 21
685 51.52 radiation 30 4320 < th dose independent rect. 1 23
694 51.53 radiation 30 4320 < th dose independent no NA NA
769 51.53 radiation 20 270 > th dose independent rect. 12 23
819 51.55 radiation 30 4320 > th dose independent rect. 13 21
830 51.56 radiation 40 720 < th dose independent rect. 9 1
841 51.56 radiation 30 4320 > th dose independent rect. 15 19
852 51.57 radiation 40 270 < th dose independent rect. 7 14
856 51.57 humidity 80 270 < th dose dependent sin 23 NA
861 51.57 radiation 10 4320 < th dose dependent rect. 15 19
866 51.58 radiation 40 270 < th dose independent rect. 7 12
878 51.60 temperature 25 4320 > th dose independent rect. 20 1
880 51.60 radiation 10 720 > th dose independent rect. 6 8
882 51.60 humidity 70 270 > th dose independent rect. 20 23
884 51.60 radiation 40 270 < th dose independent rect. 16 23
896 51.62 radiation 30 4320 > th dose independent sin 12 NA
910 51.62 temperature 30 90 < th dose independent rect. 13 23
912 51.62 humidity 60 270 > th dose dependent sin 22 NA
915 51.62 radiation 20 4320 > th dose dependent rect. 15 19
930 51.63 radiation 40 4320 < th dose dependent rect. 17 19
942 51.65 radiation 20 720 < th dose independent rect. 16 19