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Os03g0208500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Integral membrane protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0175) R2 : 0.604
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.09 (0.0422) R2dC : 0.587 R2C : 0.578
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.177 (0.0368) R2dN8 : 0.0259 R2N8 : 0.0167
σ : 0.33
deviance : 49.81
__
_____
C
peak time of C : 22.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.34 0.267 12.3 0.587 1.09 0.32 0.148 0.696 -0.0711 22.6 1011 9799 -- --
33.67 0.27 12.3 0.918 1.09 0.399 0.185 -- -0.00446 22.5 1006 29393 -- --
32.43 0.265 12.3 0.581 1.09 0.317 -- 0.696 -0.0722 22.6 1011 9822 -- --
33.75 0.271 12.3 0.908 1.09 0.377 -- -- -0.00114 22.6 1007 28685 -- --
105.6 0.479 12.3 0.576 -- 0.307 -- 0.666 -0.0506 -- 1010 11395 -- --
37.61 0.288 12.3 0.684 1.09 -- 0.136 -- -0.101 22.5 -- -- -- --
37.69 0.287 12.3 0.678 1.09 -- -- -- -0.101 22.5 -- -- -- --
107.05 0.482 12.2 0.903 -- 0.331 -- -- -0.00732 -- 1009 27402 -- --
47.34 0.32 12.3 -- 1.06 -0.286 -- -- -0.229 22.6 1013 47520 -- --
110.48 0.491 12.3 0.697 -- -- -- -- -0.0969 -- -- -- -- --
49.81 0.33 12.3 -- 1.09 -- -- -- -0.177 22.6 -- -- -- --
118.55 0.507 12.3 -- -- -0.39 -- -- -0.236 -- 1016 44220 -- --
123.31 0.518 12.3 -- -- -- -- -- -0.174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.90 radiation 1.0 90 > th dose independent sin 5 NA
3 25.29 radiation 1.0 90 < th dose independent sin 5 NA
5 25.57 radiation 1.0 90 < th dose dependent sin 5 NA
11 25.89 radiation 1.0 90 > th dose independent rect. 18 19
15 26.14 radiation 1.0 90 > th dose independent rect. 4 9
49 27.13 temperature 10.0 10 > th dose dependent rect. 6 18
52 27.21 radiation 1.0 90 < th dose independent rect. 23 18
54 27.25 radiation 1.0 90 < th dose independent rect. 1 16
55 27.25 radiation 1.0 270 < th dose dependent rect. 22 9
60 27.37 radiation 1.0 270 < th dose dependent sin 9 NA
67 27.46 radiation 10.0 10 < th dose dependent rect. 24 17
68 27.47 radiation 1.0 90 < th dose independent rect. 23 8
70 27.48 humidity 50.0 90 > th dose independent rect. 5 8
74 27.55 radiation 1.0 90 < th dose independent rect. 1 6
81 27.58 radiation 40.0 90 < th dose independent rect. 13 16
82 27.59 precipitation 0.1 270 < th dose independent rect. 3 8
84 27.59 precipitation 0.1 270 < th dose dependent rect. 3 8
108 27.67 precipitation 0.1 90 < th dose independent rect. 5 8
110 27.67 precipitation 0.1 90 < th dose dependent rect. 5 8
111 27.71 temperature 10.0 90 > th dose independent rect. 5 8
112 27.71 atmosphere 995.0 90 > th dose independent rect. 5 8
113 27.71 atmosphere 1015.0 90 < th dose independent rect. 5 8
115 27.71 temperature 10.0 90 > th dose independent rect. 13 16
117 27.73 radiation 1.0 270 < th dose independent rect. 21 10
119 27.74 humidity 50.0 270 > th dose independent rect. 3 8
121 27.74 precipitation 0.1 90 < th dose independent rect. 13 16
122 27.74 radiation 1.0 90 < th dose dependent rect. 1 16
123 27.74 precipitation 0.1 90 < th dose dependent rect. 13 16
135 27.84 radiation 1.0 270 < th dose dependent rect. 22 17
138 27.85 temperature 10.0 270 > th dose independent rect. 3 8
139 27.85 atmosphere 995.0 270 > th dose independent rect. 3 8
140 27.85 atmosphere 1015.0 270 < th dose independent rect. 3 8
142 27.85 temperature 10.0 270 > th dose independent rect. 11 16
143 27.85 atmosphere 995.0 270 > th dose independent rect. 11 17
151 27.90 wind 9.0 90 < th dose independent rect. 5 8
158 27.91 wind 9.0 270 < th dose independent rect. 3 8
162 27.93 humidity 50.0 10 > th dose independent rect. 6 7
164 27.95 wind 7.0 270 < th dose independent rect. 17 16
167 27.96 radiation 1.0 90 < th dose dependent rect. 1 7
168 27.97 radiation 1.0 270 > th dose independent sin 10 NA
173 27.98 radiation 1.0 270 < th dose independent sin 10 NA
188 28.01 wind 7.0 270 < th dose independent rect. 16 7
189 28.01 atmosphere 995.0 90 > th dose independent rect. 13 16
205 28.05 wind 9.0 90 < th dose independent rect. 13 16
206 28.05 wind 9.0 270 < th dose independent rect. 5 17
207 28.05 atmosphere 995.0 270 > th dose independent rect. 23 17
208 28.06 wind 1.0 270 > th dose independent rect. 16 7
213 28.09 temperature 10.0 270 > th dose independent rect. 22 7
214 28.09 temperature 30.0 270 < th dose independent rect. 22 7
215 28.09 humidity 50.0 270 > th dose independent rect. 22 7
218 28.09 atmosphere 995.0 270 > th dose independent rect. 22 7
219 28.09 radiation 20.0 270 < th dose independent rect. 22 7
222 28.09 temperature 10.0 270 > th dose independent rect. 5 17
225 28.10 radiation 20.0 270 < th dose dependent rect. 22 7
228 28.11 wind 9.0 270 < th dose independent rect. 22 7
234 28.12 temperature 10.0 270 > th dose dependent rect. 16 8
241 28.14 precipitation 0.1 270 < th dose independent rect. 11 16
245 28.14 precipitation 0.1 270 < th dose dependent rect. 11 16
249 28.15 temperature 15.0 270 > th dose independent rect. 9 8
258 28.18 temperature 10.0 270 > th dose independent rect. 16 7
259 28.18 radiation 30.0 270 < th dose independent rect. 16 7
261 28.18 temperature 10.0 270 > th dose independent rect. 23 17
266 28.21 atmosphere 1015.0 270 < th dose independent rect. 5 17
274 28.25 atmosphere 995.0 270 > th dose independent rect. 24 15
276 28.26 wind 9.0 270 < th dose independent rect. 11 17
290 28.29 radiation 40.0 270 < th dose independent rect. 15 9
293 28.31 temperature 10.0 270 > th dose independent rect. 15 9
294 28.31 temperature 10.0 270 > th dose independent rect. 24 15
295 28.31 atmosphere 1015.0 270 < th dose independent rect. 24 15
298 28.32 precipitation 0.1 10 < th dose independent rect. 6 7
301 28.32 precipitation 0.1 10 < th dose dependent rect. 6 7
306 28.33 temperature 10.0 10 > th dose independent rect. 6 7
308 28.33 atmosphere 995.0 10 > th dose independent rect. 6 7
309 28.33 atmosphere 1015.0 10 < th dose independent rect. 6 7
320 28.33 precipitation 0.1 270 < th dose independent rect. 17 16
321 28.33 temperature 10.0 10 > th dose independent rect. 13 17
323 28.33 precipitation 0.1 270 < th dose dependent rect. 17 16
324 28.34 radiation 30.0 270 < th dose independent rect. 17 16
325 28.34 wind 9.0 270 < th dose independent rect. 23 17
344 28.40 wind 9.0 270 < th dose independent rect. 24 15
346 28.40 precipitation 0.1 270 < th dose independent rect. 5 17
347 28.40 temperature 10.0 270 > th dose dependent rect. 4 7
348 28.40 precipitation 0.1 270 < th dose dependent rect. 5 17
349 28.41 precipitation 0.1 270 < th dose independent rect. 9 8
351 28.41 precipitation 0.1 270 < th dose dependent rect. 9 8
368 28.43 atmosphere 1015.0 270 < th dose independent rect. 23 17
376 28.45 temperature 10.0 1440 > th dose independent rect. 7 7
379 28.45 atmosphere 995.0 1440 > th dose independent rect. 7 7
389 28.45 wind 1.0 270 > th dose independent rect. 15 9
391 28.45 temperature 10.0 1440 > th dose independent rect. 14 17
411 28.48 precipitation 0.1 270 < th dose independent rect. 16 7
428 28.48 precipitation 0.1 270 < th dose dependent rect. 16 7
430 28.49 wind 1.0 270 > th dose independent rect. 9 8
432 28.49 atmosphere 1015.0 270 < th dose independent rect. 9 8
434 28.49 temperature 10.0 270 > th dose independent rect. 17 16
441 28.50 precipitation 0.1 270 < th dose independent rect. 22 7
444 28.50 precipitation 0.1 270 < th dose dependent rect. 22 7
445 28.51 wind 1.0 10 > th dose independent rect. 6 7
452 28.52 atmosphere 995.0 10 > th dose independent rect. 13 17
453 28.52 precipitation 0.1 270 < th dose independent rect. 23 17
455 28.52 precipitation 0.1 270 < th dose dependent rect. 23 17
492 28.61 wind 9.0 10 < th dose independent rect. 13 17
501 28.64 atmosphere 995.0 270 > th dose independent rect. 9 8
504 28.65 temperature 30.0 90 < th dose independent rect. 13 16
509 28.67 precipitation 0.1 270 < th dose independent rect. 24 15
515 28.67 precipitation 0.1 270 < th dose dependent rect. 24 15
516 28.68 humidity 50.0 270 > th dose dependent rect. 22 7
530 28.70 radiation 40.0 10 < th dose independent rect. 12 18
531 28.71 wind 9.0 270 < th dose independent rect. 9 8
539 28.72 radiation 40.0 10 < th dose dependent rect. 13 17
540 28.73 humidity 80.0 10 > th dose independent rect. 24 6
548 28.75 precipitation 0.1 270 < th dose independent rect. 15 9
552 28.75 precipitation 0.1 270 < th dose dependent rect. 15 9
559 28.77 precipitation 0.1 10 < th dose independent rect. 6 18
562 28.77 radiation 40.0 90 < th dose dependent rect. 17 8
565 28.77 precipitation 0.1 10 < th dose dependent rect. 6 18
567 28.78 temperature 30.0 270 < th dose independent rect. 4 7
571 28.79 humidity 50.0 270 > th dose independent rect. 17 16
587 28.83 temperature 15.0 10 > th dose independent rect. 6 18
592 28.84 humidity 50.0 10 > th dose dependent rect. 24 6
595 28.85 humidity 50.0 270 > th dose independent rect. 24 16
617 28.89 humidity 80.0 270 > th dose independent rect. 23 5
624 28.90 wind 9.0 270 < th dose independent rect. 4 19
641 28.93 wind 9.0 10 < th dose independent rect. 24 6
642 28.93 temperature 10.0 10 > th dose independent rect. 24 6
643 28.93 temperature 30.0 10 < th dose independent rect. 24 6
644 28.93 humidity 50.0 10 > th dose independent rect. 24 6
647 28.93 atmosphere 995.0 10 > th dose independent rect. 24 6
648 28.93 radiation 20.0 10 < th dose independent rect. 24 6
663 28.94 wind 9.0 10 < th dose independent rect. 6 18
669 28.95 atmosphere 1015.0 270 < th dose independent rect. 16 7
682 28.97 temperature 10.0 10 > th dose dependent rect. 6 7
684 28.98 temperature 10.0 270 > th dose independent rect. 23 5
685 28.98 temperature 30.0 270 < th dose independent rect. 23 5
686 28.98 humidity 50.0 270 > th dose independent rect. 23 5
689 28.98 atmosphere 995.0 270 > th dose independent rect. 23 5
697 28.98 temperature 10.0 270 > th dose independent rect. 4 19
706 28.99 wind 9.0 270 < th dose independent rect. 23 5
710 28.99 atmosphere 1015.0 10 < th dose independent rect. 6 18
736 29.01 atmosphere 1015.0 10 < th dose independent rect. 24 6
739 29.01 atmosphere 995.0 90 > th dose independent rect. 17 8
746 29.03 atmosphere 1015.0 270 < th dose independent rect. 22 7
771 29.05 temperature 10.0 270 > th dose dependent rect. 5 4
797 29.08 temperature 30.0 10 < th dose independent rect. 12 18
832 29.12 humidity 50.0 90 > th dose independent rect. 17 8
840 29.13 humidity 50.0 90 > th dose independent rect. 13 16
877 29.16 atmosphere 995.0 270 > th dose independent rect. 17 16
881 29.17 precipitation 0.1 270 < th dose independent rect. 23 5
887 29.17 precipitation 0.1 270 < th dose dependent rect. 23 5
902 29.20 humidity 80.0 270 > th dose independent rect. 24 3
910 29.20 radiation 40.0 270 < th dose independent rect. 4 7
912 29.20 humidity 50.0 10 > th dose independent rect. 13 17
923 29.22 atmosphere 1015.0 90 < th dose independent rect. 13 16
927 29.23 temperature 10.0 1440 > th dose independent rect. 1 6
930 29.23 temperature 30.0 1440 < th dose independent rect. 1 6
934 29.23 humidity 50.0 1440 > th dose independent rect. 1 6
940 29.23 atmosphere 995.0 1440 > th dose independent rect. 1 6
941 29.23 radiation 40.0 1440 < th dose independent rect. 1 6
955 29.23 temperature 10.0 1440 > th dose independent rect. 7 18