Os03g0207700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0207700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.81 | 0.573 | 3.75 | 0.963 | 0.388 | 0.832 | -0.131 | -0.0852 | 0.177 | 9.8 | 24.12 | 1500 | -- | -- |
| 148.81 | 0.568 | 3.75 | 0.935 | 0.39 | 0.825 | -0.131 | -- | 0.166 | 9.82 | 24.1 | 1502 | -- | -- |
| 148.87 | 0.568 | 3.75 | 0.961 | 0.388 | 0.834 | -- | -0.0914 | 0.178 | 9.78 | 24.13 | 1502 | -- | -- |
| 148.88 | 0.568 | 3.75 | 0.933 | 0.389 | 0.826 | -- | -- | 0.168 | 9.78 | 24.1 | 1502 | -- | -- |
| 153.63 | 0.577 | 3.76 | 0.865 | -- | 0.82 | -- | 0.143 | 0.175 | -- | 23.6 | 2243 | -- | -- |
| 175.6 | 0.621 | 3.82 | 0.605 | 0.393 | -- | -0.147 | -- | -0.149 | 10.2 | -- | -- | -- | -- |
| 175.68 | 0.621 | 3.82 | 0.599 | 0.394 | -- | -- | -- | -0.149 | 10.2 | -- | -- | -- | -- |
| 153.51 | 0.577 | 3.75 | 0.97 | -- | 0.875 | -- | -- | 0.227 | -- | 23.7 | 2237 | -- | -- |
| 168.14 | 0.604 | 3.8 | -- | 0.396 | 0.642 | -- | -- | -0.0108 | 9.64 | 22.9 | 1432 | -- | -- |
| 185.08 | 0.636 | 3.83 | 0.594 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 185.15 | 0.637 | 3.84 | -- | 0.391 | -- | -- | -- | -0.216 | 10.1 | -- | -- | -- | -- |
| 175.7 | 0.617 | 3.79 | -- | -- | 0.639 | -- | -- | 0.0304 | -- | 23.55 | 2212 | -- | -- |
| 194.38 | 0.651 | 3.85 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.80 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 4 | 145.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 21 |
| 11 | 147.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 16 | 147.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 18 | 147.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 25 | 148.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 42 | 148.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 52 | 148.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 62 | 148.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 89 | 148.80 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 137 | 149.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 138 | 149.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 145 | 149.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 157 | 149.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 177 | 149.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 190 | 149.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 201 | 149.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 281 | 149.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 287 | 149.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 295 | 149.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 341 | 149.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 500 | 149.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 501 | 149.76 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 544 | 149.82 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 617 | 149.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 677 | 149.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 687 | 149.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 782 | 150.02 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 812 | 150.04 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 881 | 150.09 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 951 | 150.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |