FiT-DB / Search/ Help/ Sample detail

Os03g0206700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0269) R2 : 0.698
β1 : -1.26 (0.0987) R2dD : 0.113 R2D : 0.0482
β2 : 2 (0.0683) R2dC : 0.567 R2C : 0.521
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.611 (0.0575) R2dN8 : 0.1 R2N8 : 0.0305
σ : 0.507
deviance : 117.02
__
_____
C
peak time of C : 3.83
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
101.26 0.473 12.1 -1.55 1.98 -0.959 1.03 0.287 -0.777 4.04 23.2 745 -- --
101.3 0.469 12.1 -1.52 1.98 -1.03 1.06 -- -0.767 4.05 22.95 774 -- --
104.31 0.476 12.1 -1.55 1.98 -0.964 -- 0.172 -0.779 4.04 23.21 756 -- --
104.34 0.476 12.1 -1.53 1.98 -0.996 -- -- -0.774 4.04 23.15 767 -- --
305.92 0.815 12.1 -1.59 -- -1.41 -- -0.0741 -0.871 -- 26.3 1090 -- --
114.39 0.501 12.1 -1.25 1.99 -- 0.945 -- -0.606 3.84 -- -- -- --
117.02 0.507 12.1 -1.26 2 -- -- -- -0.611 3.83 -- -- -- --
305.92 0.815 12.1 -1.6 -- -1.4 -- -- -0.874 -- 26.3 1082 -- --
158.44 0.586 12 -- 1.96 -0.196 -- -- -0.463 3.89 24.1 622 -- --
336.12 0.857 12.1 -1.18 -- -- -- -- -0.558 -- -- -- -- --
159.08 0.59 12 -- 1.97 -- -- -- -0.47 3.84 -- -- -- --
320.44 0.836 12 -- -- 1.85 -- -- -0.218 -- 38.82 1151 -- --
372.89 0.901 12 -- -- -- -- -- -0.427 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 87.80 temperature 10.0 270 > th dose dependent rect. 15 20
6 90.44 temperature 10.0 270 > th dose dependent rect. 2 9
18 92.52 temperature 20.0 270 > th dose independent rect. 5 15
20 92.65 atmosphere 995.0 270 > th dose dependent rect. 11 4
22 93.01 temperature 15.0 270 > th dose independent rect. 15 20
34 93.70 radiation 1.0 270 > th dose independent rect. 11 4
42 94.12 radiation 40.0 270 < th dose independent rect. 15 20
43 94.13 humidity 80.0 270 < th dose independent rect. 11 4
45 94.17 atmosphere 995.0 270 > th dose independent rect. 11 4
47 94.21 precipitation 0.1 270 < th dose independent rect. 11 4
48 94.21 precipitation 0.1 270 < th dose dependent rect. 11 4
51 94.31 wind 7.0 270 < th dose independent rect. 11 4
56 94.56 temperature 10.0 270 > th dose independent rect. 11 4
57 94.56 atmosphere 1015.0 270 < th dose independent rect. 11 4
64 94.74 wind 9.0 270 < th dose independent rect. 15 20
70 94.89 temperature 20.0 270 > th dose independent rect. 3 8
71 94.91 humidity 50.0 10 > th dose independent rect. 18 18
73 94.96 humidity 50.0 90 > th dose independent rect. 17 19
74 94.97 radiation 20.0 270 > th dose independent rect. 11 4
83 95.19 atmosphere 995.0 10 > th dose dependent rect. 12 6
96 95.59 temperature 15.0 90 > th dose independent rect. 17 19
104 95.75 radiation 1.0 270 > th dose dependent rect. 11 4
123 96.06 radiation 30.0 270 > th dose independent rect. 12 2
129 96.13 precipitation 0.1 270 < th dose independent rect. 15 20
130 96.13 precipitation 0.1 270 < th dose dependent rect. 15 20
133 96.19 radiation 40.0 30 < th dose dependent sin 15 NA
187 96.92 wind 1.0 270 > th dose independent rect. 11 4
216 97.10 wind 9.0 90 < th dose independent rect. 17 19
219 97.12 atmosphere 1000.0 10 > th dose independent rect. 12 6
225 97.16 atmosphere 1015.0 270 < th dose independent rect. 15 20
228 97.18 humidity 60.0 270 > th dose independent rect. 3 8
232 97.20 radiation 40.0 270 < th dose independent rect. 6 14
240 97.28 radiation 1.0 270 > th dose dependent rect. 12 2
253 97.33 temperature 30.0 720 < th dose dependent rect. 3 4
263 97.42 radiation 20.0 90 < th dose independent sin 16 NA
273 97.49 wind 9.0 270 < th dose dependent rect. 11 4
279 97.51 radiation 1.0 90 > th dose dependent sin 16 NA
281 97.53 wind 1.0 90 > th dose independent rect. 17 19
289 97.59 temperature 30.0 720 < th dose dependent rect. 5 2
308 97.67 temperature 20.0 10 > th dose independent rect. 12 6
314 97.72 atmosphere 995.0 90 > th dose independent rect. 17 19
320 97.74 atmosphere 1015.0 270 < th dose dependent rect. 16 4
325 97.77 precipitation 0.1 90 < th dose independent rect. 17 19
327 97.77 precipitation 0.1 90 < th dose dependent rect. 17 19
329 97.78 temperature 15.0 10 > th dose independent rect. 18 18
331 97.79 temperature 25.0 10 > th dose independent rect. 18 18
332 97.79 humidity 90.0 270 < th dose dependent rect. 11 4
338 97.82 wind 9.0 10 < th dose independent rect. 12 6
339 97.82 temperature 10.0 10 > th dose independent rect. 12 6
341 97.82 atmosphere 1015.0 10 < th dose independent rect. 12 6
366 97.92 atmosphere 995.0 10 > th dose independent rect. 18 18
373 97.96 precipitation 0.1 10 < th dose independent rect. 12 6
374 97.96 atmosphere 1015.0 90 < th dose independent rect. 17 19
376 97.96 precipitation 0.1 10 < th dose dependent rect. 12 6
387 98.04 wind 1.0 30 > th dose independent rect. 4 8
391 98.06 wind 9.0 10 < th dose independent rect. 18 18
397 98.11 atmosphere 995.0 270 > th dose independent rect. 22 17
417 98.17 temperature 25.0 270 > th dose independent rect. 24 9
424 98.18 temperature 15.0 270 > th dose independent rect. 15 7
425 98.18 precipitation 0.1 270 < th dose independent rect. 22 17
428 98.18 precipitation 0.1 270 < th dose dependent rect. 22 17
438 98.24 temperature 30.0 30 < th dose independent rect. 12 5
439 98.24 atmosphere 1015.0 270 < th dose dependent rect. 17 2
453 98.26 temperature 10.0 270 > th dose dependent rect. 4 16
467 98.32 radiation 40.0 270 < th dose independent rect. 15 7
470 98.33 wind 1.0 270 > th dose independent rect. 15 20
472 98.34 temperature 10.0 270 > th dose independent rect. 22 17
480 98.37 temperature 15.0 720 > th dose dependent rect. 24 3
485 98.40 temperature 30.0 270 < th dose independent rect. 11 4
517 98.48 atmosphere 1015.0 270 < th dose independent rect. 15 7
528 98.52 temperature 10.0 720 > th dose dependent rect. 23 6
531 98.53 temperature 30.0 270 < th dose independent rect. 12 1
536 98.56 atmosphere 1015.0 10 < th dose independent rect. 18 18
541 98.58 radiation 20.0 90 > th dose independent rect. 12 19
545 98.60 wind 9.0 270 < th dose independent rect. 15 7
568 98.65 radiation 20.0 90 > th dose independent sin 15 NA
571 98.66 temperature 10.0 270 > th dose dependent rect. 15 7
572 98.66 radiation 1.0 270 < th dose dependent rect. 20 15
587 98.72 wind 9.0 270 < th dose independent rect. 22 17
592 98.75 wind 3.0 270 > th dose independent rect. 12 1
614 98.80 wind 1.0 270 > th dose independent rect. 15 7
650 98.89 wind 9.0 90 < th dose dependent rect. 13 4
669 98.95 atmosphere 1015.0 90 < th dose dependent rect. 17 19
671 98.97 precipitation 0.1 270 < th dose independent rect. 15 7
672 98.97 precipitation 0.1 270 < th dose dependent rect. 15 7
689 99.03 temperature 25.0 30 > th dose independent rect. 1 11
708 99.07 temperature 25.0 30 > th dose independent rect. 4 8
719 99.09 atmosphere 995.0 270 > th dose independent rect. 15 20
768 99.17 radiation 1.0 90 > th dose dependent rect. 12 18
865 99.38 temperature 10.0 270 > th dose dependent rect. 11 4
903 99.49 atmosphere 1000.0 30 > th dose independent rect. 22 19
911 99.50 temperature 15.0 10 > th dose dependent rect. 6 6
915 99.52 temperature 25.0 720 < th dose dependent rect. 21 16
925 99.55 atmosphere 995.0 270 > th dose independent rect. 11 16
935 99.56 atmosphere 1015.0 10 < th dose dependent rect. 18 18
951 99.59 temperature 25.0 720 < th dose dependent sin 7 NA
953 99.59 temperature 10.0 270 > th dose dependent rect. 16 4
980 99.61 wind 1.0 270 > th dose dependent rect. 12 2