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Os03g0203100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.43 (0.03) R2 : 0.757
β1 : 1.48 (0.11) R2dD : 0.101 R2D : 0.0826
β2 : 2.75 (0.0773) R2dC : 0.675 R2C : 0.659
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.165 (0.064) R2dN8 : 0.00475 R2N8 : -0.00752
σ : 0.564
deviance : 144.95
__
_____
C
peak time of C : 16.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.03 0.519 8.45 1.4 2.45 0.771 1.62 -0.0165 0.0891 17.3 21.42 119 -- --
121.8 0.514 8.45 1.39 2.44 0.775 1.6 -- 0.0894 17.3 20.56 122 -- --
127.85 0.527 8.45 1.38 2.45 0.769 -- 0.299 0.0982 17.3 20.55 123 -- --
128.17 0.527 8.45 1.38 2.45 0.773 -- -- 0.0955 17.3 20.42 122 -- --
163.44 0.595 8.54 1.02 -- 2.74 -- 0.482 -0.192 -- 1.86 569 -- --
138.26 0.551 8.43 1.47 2.74 -- 1.59 -- 0.157 16.6 -- -- -- --
144.95 0.564 8.43 1.48 2.75 -- -- -- 0.165 16.6 -- -- -- --
158.66 0.587 8.43 1.35 -- 2.92 -- -- 0.00343 -- 2.04 595 -- --
179.97 0.625 8.45 -- 2.43 0.792 -- -- 0.0649 17.2 20.08 122 -- --
546.23 1.09 8.41 1.38 -- -- -- -- 0.0931 -- -- -- -- --
203 0.666 8.47 -- 2.72 -- -- -- -0.000249 16.6 -- -- -- --
207.09 0.67 8.46 -- -- 2.92 -- -- -0.0681 -- 1.8 595 -- --
596.39 1.14 8.44 -- -- -- -- -- -0.0599 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.30 wind 7.0 270 < th dose independent rect. 7 20
2 112.65 radiation 20.0 270 < th dose dependent rect. 3 6
5 112.91 radiation 10.0 270 < th dose independent rect. 3 5
7 113.01 radiation 20.0 270 < th dose dependent rect. 3 10
9 113.12 temperature 30.0 270 < th dose dependent rect. 21 6
13 113.30 wind 9.0 270 < th dose independent rect. 5 23
14 113.30 radiation 40.0 270 < th dose dependent rect. 3 14
16 113.53 temperature 10.0 270 > th dose dependent rect. 3 4
45 114.18 radiation 40.0 90 < th dose independent rect. 4 19
53 114.39 wind 5.0 270 < th dose independent rect. 3 4
75 114.85 wind 7.0 270 < th dose independent rect. 7 10
87 115.09 radiation 10.0 270 < th dose independent rect. 3 16
88 115.10 atmosphere 1010.0 270 < th dose independent rect. 3 4
89 115.10 atmosphere 1000.0 270 > th dose independent rect. 20 7
91 115.15 humidity 70.0 90 > th dose independent rect. 4 7
94 115.21 precipitation 0.1 270 < th dose independent rect. 7 20
95 115.21 precipitation 0.1 270 < th dose dependent rect. 7 20
98 115.25 precipitation 0.1 270 < th dose independent rect. 3 4
99 115.25 precipitation 0.1 270 < th dose dependent rect. 3 4
103 115.29 humidity 70.0 270 > th dose independent rect. 3 4
105 115.30 radiation 40.0 270 < th dose independent rect. 10 22
112 115.33 temperature 10.0 270 > th dose independent rect. 3 4
114 115.33 temperature 30.0 270 < th dose independent rect. 3 4
115 115.33 humidity 50.0 270 > th dose independent rect. 3 4
117 115.33 atmosphere 995.0 270 > th dose independent rect. 3 4
120 115.33 temperature 10.0 270 > th dose independent rect. 7 20
133 115.66 radiation 40.0 270 < th dose independent rect. 3 14
135 115.67 radiation 40.0 270 < th dose independent rect. 3 16
142 115.74 wind 5.0 270 < th dose independent rect. 4 1
152 115.78 radiation 40.0 90 < th dose dependent rect. 4 19
160 115.87 radiation 10.0 270 < th dose independent rect. 3 11
165 115.94 temperature 10.0 270 > th dose dependent rect. 2 6
167 115.96 humidity 90.0 10 < th dose dependent rect. 9 6
176 116.05 temperature 30.0 270 < th dose dependent rect. 23 2
181 116.12 humidity 70.0 90 > th dose independent rect. 4 16
200 116.35 radiation 40.0 270 < th dose dependent rect. 11 21
201 116.37 wind 9.0 270 < th dose dependent rect. 7 20
202 116.39 radiation 40.0 270 < th dose dependent rect. 15 16
210 116.49 wind 9.0 270 < th dose dependent rect. 3 4
219 116.55 wind 1.0 270 > th dose independent rect. 3 4
234 116.71 radiation 1.0 90 > th dose dependent rect. 8 11
251 116.75 wind 7.0 270 < th dose independent rect. 2 6
256 116.76 radiation 40.0 270 < th dose dependent rect. 13 19
264 116.82 humidity 70.0 270 > th dose independent rect. 2 6
275 116.86 wind 9.0 270 < th dose dependent rect. 7 8
280 116.90 precipitation 0.1 270 < th dose independent rect. 4 1
282 116.90 radiation 1.0 270 < th dose dependent rect. 4 1
283 116.90 precipitation 0.1 270 < th dose dependent rect. 4 1
287 116.91 precipitation 0.1 270 < th dose independent rect. 8 18
288 116.91 precipitation 0.1 270 < th dose dependent rect. 8 18
298 116.96 temperature 10.0 270 > th dose independent rect. 4 1
300 116.96 temperature 30.0 270 < th dose independent rect. 4 1
301 116.96 humidity 50.0 270 > th dose independent rect. 4 1
304 116.96 atmosphere 995.0 270 > th dose independent rect. 4 1
305 116.96 atmosphere 1010.0 270 < th dose independent rect. 4 1
307 116.96 radiation 20.0 270 < th dose independent rect. 4 1
310 116.96 temperature 10.0 270 > th dose independent rect. 5 23
311 116.96 radiation 30.0 270 < th dose dependent rect. 4 1
318 116.99 radiation 1.0 270 < th dose independent rect. 4 1
321 117.01 precipitation 0.1 270 < th dose independent rect. 2 6
323 117.01 precipitation 0.1 270 < th dose dependent rect. 2 6
325 117.02 temperature 15.0 90 > th dose independent rect. 17 15
331 117.06 temperature 10.0 270 > th dose independent rect. 2 6
333 117.06 temperature 30.0 270 < th dose independent rect. 2 6
334 117.06 humidity 50.0 270 > th dose independent rect. 2 6
336 117.06 atmosphere 995.0 270 > th dose independent rect. 2 6
338 117.06 temperature 10.0 270 > th dose independent rect. 8 18
356 117.18 humidity 70.0 90 > th dose independent rect. 4 11
361 117.20 temperature 15.0 270 > th dose independent rect. 15 16
408 117.36 radiation 20.0 270 < th dose independent rect. 15 16
420 117.40 wind 9.0 270 < th dose dependent rect. 8 18
426 117.42 temperature 10.0 270 > th dose dependent rect. 17 14
446 117.53 humidity 90.0 90 < th dose independent rect. 8 9
467 117.62 atmosphere 995.0 270 > th dose independent rect. 7 20
495 117.71 humidity 50.0 270 > th dose dependent rect. 3 4
498 117.73 wind 9.0 270 < th dose dependent rect. 4 1
503 117.74 temperature 30.0 10 < th dose dependent rect. 22 7
513 117.78 temperature 10.0 1440 > th dose independent rect. 5 5
516 117.78 atmosphere 995.0 1440 > th dose independent rect. 5 5
517 117.78 atmosphere 1015.0 1440 < th dose independent rect. 5 5
519 117.78 temperature 10.0 1440 > th dose independent rect. 10 19
556 117.91 temperature 15.0 90 > th dose independent rect. 8 9
592 118.04 atmosphere 1015.0 90 < th dose independent rect. 17 15
594 118.05 radiation 20.0 270 < th dose independent rect. 13 19
607 118.10 humidity 50.0 270 > th dose dependent rect. 20 7
620 118.17 atmosphere 995.0 270 > th dose dependent rect. 21 5
648 118.21 wind 1.0 270 > th dose independent rect. 2 6
662 118.24 radiation 40.0 10 < th dose dependent rect. 6 16
672 118.30 humidity 50.0 270 > th dose dependent rect. 4 1
681 118.33 atmosphere 1005.0 90 > th dose dependent rect. 4 4
682 118.33 radiation 1.0 90 > th dose dependent rect. 8 7
705 118.43 radiation 40.0 90 < th dose independent rect. 3 22
721 118.46 atmosphere 1005.0 270 > th dose dependent rect. 4 1
738 118.52 wind 9.0 1440 < th dose independent rect. 5 4
742 118.52 humidity 50.0 1440 > th dose independent rect. 5 4
767 118.57 humidity 60.0 90 > th dose dependent rect. 4 16
800 118.63 temperature 30.0 10 < th dose dependent rect. 20 9
811 118.67 atmosphere 1005.0 270 > th dose independent rect. 3 4
816 118.69 atmosphere 1015.0 270 < th dose independent rect. 15 16
822 118.72 radiation 20.0 270 < th dose dependent sin 3 NA
837 118.77 radiation 1.0 270 > th dose independent rect. 7 8
838 118.78 radiation 40.0 90 < th dose dependent rect. 3 22
839 118.79 humidity 50.0 90 > th dose independent rect. 17 15
860 118.84 radiation 40.0 270 < th dose dependent sin 5 NA
871 118.87 humidity 50.0 270 > th dose independent rect. 15 16
876 118.89 humidity 90.0 10 < th dose independent rect. 4 5
888 118.92 temperature 10.0 90 > th dose dependent rect. 8 7
889 118.92 temperature 10.0 90 > th dose dependent rect. 8 9
891 118.93 wind 7.0 270 < th dose independent rect. 22 14
893 118.94 radiation 40.0 270 < th dose independent rect. 12 10
898 118.97 temperature 15.0 270 > th dose independent rect. 12 10
899 118.97 precipitation 0.1 270 < th dose independent rect. 7 10
900 118.97 precipitation 0.1 270 < th dose dependent rect. 7 10
922 119.00 atmosphere 995.0 270 > th dose independent rect. 8 18
939 119.04 radiation 30.0 90 < th dose independent rect. 12 23
998 119.22 wind 9.0 270 < th dose independent rect. 20 7