Os03g0201000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0201000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.94 | 0.517 | 6.14 | 2.26 | 0.32 | 1.14 | -0.221 | 0.185 | 0.236 | 8.02 | 20.1 | 1260 | -- | -- |
| 121.01 | 0.512 | 6.15 | 2.24 | 0.328 | 1.11 | -0.241 | -- | 0.238 | 8.07 | 20.11 | 1238 | -- | -- |
| 121.07 | 0.512 | 6.14 | 2.26 | 0.323 | 1.15 | -- | 0.211 | 0.239 | 8.16 | 20.1 | 1260 | -- | -- |
| 119.65 | 0.509 | 6.16 | 2.25 | 0.33 | 1.02 | -- | -- | 0.196 | 8.12 | 21.1 | 1255 | -- | -- |
| 126.39 | 0.524 | 6.15 | 2.26 | -- | 1.17 | -- | 0.261 | 0.245 | -- | 20.2 | 1345 | -- | -- |
| 147.12 | 0.569 | 6.1 | 2.68 | 0.314 | -- | -0.526 | -- | 0.462 | 6.86 | -- | -- | -- | -- |
| 147.75 | 0.569 | 6.1 | 2.67 | 0.313 | -- | -- | -- | 0.464 | 7.28 | -- | -- | -- | -- |
| 125.24 | 0.521 | 6.17 | 2.24 | -- | 1.02 | -- | -- | 0.198 | -- | 21.2 | 1336 | -- | -- |
| 145.94 | 0.563 | 6.27 | -- | 0.317 | 2.32 | -- | -- | -0.311 | 7.6 | 17.4 | 47520 | -- | -- |
| 152.93 | 0.578 | 6.1 | 2.68 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 335.98 | 0.857 | 6.16 | -- | 0.342 | -- | -- | -- | 0.167 | 6.77 | -- | -- | -- | -- |
| 151.27 | 0.573 | 6.28 | -- | -- | 2.32 | -- | -- | -0.311 | -- | 17.47 | 47520 | -- | -- |
| 342.08 | 0.863 | 6.17 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 4 | 120.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 28 | 121.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 59 | 121.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 20 |
| 61 | 121.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 70 | 121.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 162 | 121.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 175 | 121.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 200 | 121.64 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 201 | 121.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 206 | 121.65 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 218 | 121.68 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 241 | 121.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 245 | 121.75 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 274 | 121.81 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 286 | 121.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 328 | 121.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 372 | 122.15 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 374 | 122.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 385 | 122.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 404 | 122.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 419 | 122.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 463 | 122.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 480 | 122.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 485 | 122.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 561 | 122.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 571 | 122.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 623 | 122.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 751 | 122.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 793 | 122.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 818 | 122.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 852 | 122.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 919 | 123.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 17 |