Os03g0198200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0198200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.81 | 0.676 | 6.31 | -0.688 | 0.4 | -1.49 | 0.00505 | -1.34 | -0.771 | 9.33 | 23.71 | 1178 | -- | -- |
| 207.6 | 0.671 | 6.27 | -0.341 | 0.391 | -1.6 | 0.0834 | -- | -0.691 | 9.36 | 23.9 | 1178 | -- | -- |
| 206.81 | 0.67 | 6.31 | -0.687 | 0.398 | -1.49 | -- | -1.34 | -0.77 | 9.32 | 23.7 | 1176 | -- | -- |
| 207.62 | 0.671 | 6.27 | -0.337 | 0.39 | -1.62 | -- | -- | -0.686 | 9.26 | 23.9 | 1178 | -- | -- |
| 212.45 | 0.679 | 6.31 | -0.588 | -- | -1.7 | -- | -1.11 | -0.736 | -- | 23.65 | 1052 | -- | -- |
| 288.8 | 0.797 | 6.32 | -0.867 | 0.629 | -- | 0.75 | -- | -0.938 | 11.3 | -- | -- | -- | -- |
| 290.96 | 0.799 | 6.32 | -0.838 | 0.631 | -- | -- | -- | -0.937 | 10.9 | -- | -- | -- | -- |
| 213 | 0.68 | 6.28 | -0.315 | -- | -1.8 | -- | -- | -0.674 | -- | 23.8 | 1059 | -- | -- |
| 210.41 | 0.676 | 6.26 | -- | 0.395 | -1.69 | -- | -- | -0.637 | 9.09 | 23.87 | 1193 | -- | -- |
| 315.72 | 0.83 | 6.34 | -0.852 | -- | -- | -- | -- | -0.942 | -- | -- | -- | -- | -- |
| 309.49 | 0.823 | 6.3 | -- | 0.639 | -- | -- | -- | -0.844 | 11 | -- | -- | -- | -- |
| 215.47 | 0.684 | 6.26 | -- | -- | -1.87 | -- | -- | -0.619 | -- | 23.68 | 1059 | -- | -- |
| 334.87 | 0.854 | 6.32 | -- | -- | -- | -- | -- | -0.847 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 4 | 209.50 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 14 | 211.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 16 | 211.20 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 24 | 211.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 27 | 211.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 47 | 212.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 56 | 213.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 68 | 213.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 84 | 213.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 97 | 213.59 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 98 | 213.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 138 | 213.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 142 | 213.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 147 | 213.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 192 | 213.96 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 200 | 213.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 220 | 214.00 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 297 | 214.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 416 | 214.38 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 555 | 214.77 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 742 | 215.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 796 | 215.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |