Os03g0197200 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0197200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Sorbitol transporter.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.83	(0.0732)	R²	:	0.593
β₁	:	5.64	(0.269)	R²_dD	:	0.42	R²_D	:	0.423
β₂	:	1.77	(0.185)	R²_dC	:	0.084	R²_C	:	0.0901
β₃	:	1.92	(0.343)	R²_dE	:	0.0435	R²_E	:	-0.0525
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	11.7	(1.48)	R²_dD*E	:	0.0801	R²_D*E	:	0.0791
γ₁	:	0.682	(0.16)	R²_dN8	:	0.0228	R²_N8	:	-0.017
σ	:	1.35
deviance	:	836.19
__

_____

C
peak time of C	:	7.75
E
wheather	:	wind
threshold	:	5.593
memory length	:	3928
response mode	:	> th
dose dependency	:	dose independent
G
type of G	:	rect.
peak or start time of G	:	19.8
open length of G	:	6.88

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
836.28	1.36	5.82	5.58	1.78	1.79	0.819	10.7	0.68	7.82	5.446	3928	19.8	6.5
926.79	1.42	5.69	6.21	1.79	1.1	1.53	--	0.81	7.71	6.499	12165	20.1	6.21
836.19	1.35	5.83	5.64	1.77	1.92	--	11.7	0.682	7.75	5.593	3928	19.8	6.88
931.02	1.42	5.7	6.26	1.8	1.37	--	--	0.878	7.6	6.496	12004	20	6.37
1006.65	1.48	5.87	5.66	--	2.19	--	12	0.721	--	5.546	3925	19.7	7.24
953.69	1.45	5.77	5.83	1.84	--	1.41	--	0.653	7.73	--	--	--	--
959.36	1.45	5.77	5.86	1.84	--	--	--	0.65	7.7	--	--	--	--
971.82	1.45	5.8	5.47	--	1.96	--	--	0.865	--	-2.867e-05	10903	20.6	8.65
1384.79	1.73	5.95	--	1.69	-3.55	--	--	0.00747	6.51	6.9	47520	21.4	8.26
1141.92	1.58	5.81	5.89	--	--	--	--	0.677	--	--	--	--	--
1865.03	2.02	5.92	--	1.89	--	--	--	-0.00238	7.48	--	--	--	--
1432.19	1.76	6.18	--	--	-3.72	--	--	-0.93	--	7.828	47520	21.1	2.38
2055.81	2.12	5.96	--	--	--	--	--	0.0243	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	838.41	wind	9.0	14400	< th	dose independent	rect.	6	6
2	838.81	atmosphere	1005.0	14400	< th	dose independent	rect.	23	1
4	840.54	precipitation	0.1	14400	> th	dose independent	rect.	7	1
5	840.54	precipitation	0.1	14400	> th	dose dependent	rect.	7	1
6	840.93	precipitation	0.1	14400	< th	dose independent	rect.	7	1
7	840.93	precipitation	0.1	14400	< th	dose dependent	rect.	7	1
11	842.28	wind	9.0	14400	< th	dose independent	rect.	10	2
13	842.56	precipitation	0.1	14400	> th	dose dependent	rect.	21	1
15	842.89	wind	9.0	14400	> th	dose independent	rect.	7	5
16	843.04	wind	9.0	14400	> th	dose dependent	rect.	6	7
17	843.05	wind	5.0	4320	> th	dose dependent	rect.	20	7
19	843.17	wind	9.0	14400	> th	dose dependent	rect.	10	3
22	843.65	wind	9.0	14400	> th	dose independent	rect.	9	3
24	843.77	precipitation	0.1	14400	> th	dose dependent	rect.	20	3
32	845.85	precipitation	0.1	14400	> th	dose independent	rect.	21	1
33	845.97	precipitation	0.1	14400	< th	dose independent	rect.	21	1
35	845.97	precipitation	0.1	14400	< th	dose dependent	rect.	21	1
46	847.65	atmosphere	1005.0	14400	> th	dose independent	rect.	23	1
55	851.03	precipitation	0.1	14400	> th	dose independent	rect.	17	1
64	852.33	wind	9.0	14400	< th	dose independent	rect.	1	12
69	852.81	precipitation	0.1	14400	< th	dose independent	rect.	17	1
70	852.81	precipitation	0.1	14400	< th	dose dependent	rect.	17	1
77	853.85	wind	5.0	4320	> th	dose independent	rect.	20	6
106	857.25	wind	5.0	4320	< th	dose independent	rect.	20	6
110	857.81	atmosphere	1005.0	14400	> th	dose independent	rect.	3	1
119	858.36	wind	9.0	14400	> th	dose independent	rect.	24	13
130	859.01	atmosphere	1005.0	14400	> th	dose independent	rect.	22	6
135	859.50	atmosphere	1005.0	14400	< th	dose independent	rect.	3	1
147	860.33	precipitation	0.1	14400	> th	dose dependent	rect.	17	1
155	860.87	wind	3.0	14400	< th	dose independent	rect.	5	2
175	862.30	wind	3.0	14400	> th	dose independent	rect.	5	2
185	862.73	wind	5.0	4320	< th	dose independent	rect.	20	1
187	863.15	humidity	80.0	14400	> th	dose dependent	rect.	13	1
188	863.17	wind	3.0	14400	< th	dose independent	rect.	22	9
202	863.83	wind	5.0	4320	> th	dose independent	rect.	20	1
205	863.86	wind	3.0	14400	< th	dose dependent	rect.	6	1
214	864.37	wind	3.0	14400	> th	dose independent	rect.	22	9
226	864.99	wind	3.0	14400	< th	dose independent	rect.	1	1
243	865.58	wind	5.0	43200	> th	dose independent	rect.	23	1
248	865.69	wind	3.0	14400	> th	dose independent	rect.	1	1
252	865.84	wind	3.0	14400	< th	dose independent	rect.	1	6
262	866.16	wind	3.0	14400	< th	dose independent	rect.	22	14
274	866.66	humidity	90.0	14400	> th	dose independent	rect.	13	1
276	866.72	wind	3.0	14400	> th	dose independent	rect.	1	8
277	866.77	wind	3.0	14400	< th	dose independent	rect.	1	8
279	866.80	wind	3.0	14400	< th	dose independent	rect.	19	12
282	866.92	wind	3.0	14400	> th	dose independent	rect.	1	6
288	867.09	wind	3.0	14400	< th	dose independent	rect.	5	4
296	867.39	wind	3.0	14400	> th	dose independent	rect.	22	14
300	867.53	wind	3.0	14400	> th	dose independent	rect.	5	4
302	867.54	wind	5.0	43200	< th	dose independent	rect.	23	2
306	867.64	temperature	20.0	270	< th	dose independent	rect.	24	22
310	867.74	temperature	25.0	720	< th	dose dependent	sin	17	NA
327	868.12	temperature	25.0	720	< th	dose dependent	rect.	11	15
328	868.19	temperature	25.0	720	< th	dose dependent	rect.	13	13
338	868.39	temperature	25.0	270	< th	dose dependent	rect.	12	20
341	868.43	wind	3.0	14400	< th	dose independent	sin	7	NA
345	868.51	precipitation	0.1	14400	> th	dose dependent	rect.	4	6
359	868.72	precipitation	0.1	14400	> th	dose independent	rect.	4	6
360	868.72	wind	3.0	14400	< th	dose independent	rect.	1	11
366	868.88	wind	3.0	14400	> th	dose independent	rect.	19	13
372	869.10	wind	3.0	14400	> th	dose independent	rect.	1	11
378	869.23	precipitation	0.1	14400	< th	dose independent	rect.	4	6
380	869.23	precipitation	0.1	14400	< th	dose dependent	rect.	4	6
387	869.32	wind	1.0	14400	> th	dose dependent	rect.	1	1
404	869.64	wind	3.0	14400	> th	dose independent	sin	7	NA
410	869.68	wind	9.0	14400	< th	dose dependent	rect.	1	1
413	869.69	temperature	25.0	1440	< th	dose dependent	rect.	16	3
451	870.51	wind	3.0	14400	< th	dose independent	rect.	22	6
503	871.30	wind	3.0	43200	< th	dose dependent	rect.	21	10
514	871.46	wind	3.0	14400	> th	dose independent	rect.	22	6
537	871.78	wind	3.0	43200	< th	dose dependent	rect.	1	1
558	872.16	temperature	25.0	90	< th	dose dependent	rect.	24	23
572	872.34	precipitation	0.1	14400	> th	dose independent	rect.	4	12
586	872.52	precipitation	0.1	14400	< th	dose independent	rect.	4	12
587	872.52	precipitation	0.1	14400	< th	dose dependent	rect.	4	12
598	872.72	atmosphere	1005.0	14400	< th	dose independent	sin	11	NA
606	872.85	wind	7.0	43200	> th	dose independent	rect.	18	1
619	873.04	wind	1.0	14400	> th	dose dependent	rect.	22	9
661	873.61	wind	3.0	14400	< th	dose dependent	rect.	21	15
684	873.92	atmosphere	1005.0	14400	> th	dose independent	sin	10	NA
688	874.01	humidity	90.0	4320	> th	dose dependent	rect.	8	1
691	874.04	wind	3.0	4320	> th	dose dependent	rect.	20	1
713	874.33	precipitation	0.1	14400	< th	dose independent	rect.	4	10
714	874.33	precipitation	0.1	14400	< th	dose dependent	rect.	4	10
721	874.44	precipitation	0.1	14400	> th	dose independent	rect.	4	10
742	874.73	temperature	20.0	270	< th	dose independent	rect.	11	21
762	874.85	precipitation	0.1	14400	> th	dose independent	rect.	14	2
763	874.85	precipitation	0.1	14400	> th	dose dependent	rect.	14	2
766	874.89	temperature	20.0	720	> th	dose independent	rect.	11	8
768	874.91	radiation	1.0	14400	< th	dose dependent	rect.	7	1
769	874.92	precipitation	0.1	14400	> th	dose dependent	rect.	4	12
775	874.95	temperature	20.0	30	> th	dose independent	rect.	21	23
785	875.03	temperature	20.0	270	< th	dose independent	rect.	13	19
788	875.03	wind	9.0	14400	< th	dose dependent	rect.	22	9
803	875.14	precipitation	0.1	14400	> th	dose dependent	rect.	4	9
816	875.25	wind	3.0	14400	< th	dose dependent	rect.	4	8
827	875.38	temperature	20.0	270	> th	dose independent	rect.	24	23
838	875.53	wind	3.0	14400	< th	dose dependent	rect.	5	6
876	875.85	wind	3.0	14400	< th	dose dependent	rect.	21	5
920	876.26	wind	1.0	14400	> th	dose dependent	rect.	6	1
937	876.51	precipitation	0.1	14400	< th	dose independent	rect.	14	2
940	876.51	precipitation	0.1	14400	< th	dose dependent	rect.	14	2
975	876.82	wind	3.0	14400	< th	dose dependent	sin	8	NA
977	876.83	wind	3.0	14400	< th	dose dependent	rect.	1	11