Os03g0197100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sugar transporter protein.
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Os03g0197100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sugar transporter protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.16 | 0.707 | 15.1 | -1.85 | 3.03 | 3.25 | -0.253 | -8.54 | -0.318 | 9.5 | 24.1 | 2453 | -- | -- |
| 264.31 | 0.757 | 15 | -0.464 | 2.86 | 3.07 | 0.163 | -- | -0.494 | 9.23 | 18.02 | 9452 | -- | -- |
| 224.93 | 0.699 | 15.1 | -1.85 | 3.08 | 3.37 | -- | -9.11 | -0.245 | 9.43 | 24.65 | 2401 | -- | -- |
| 256.6 | 0.746 | 15 | 0.0508 | 2.72 | 2.53 | -- | -- | -0.462 | 9.37 | 22.13 | 9624 | -- | -- |
| 687.49 | 1.22 | 15.1 | -1.78 | -- | 3.04 | -- | -8.84 | -0.0876 | -- | 24.14 | 4440 | -- | -- |
| 449.17 | 0.994 | 14.7 | 1.31 | 2.64 | -- | -0.0802 | -- | 0.627 | 9.13 | -- | -- | -- | -- |
| 449.19 | 0.993 | 14.7 | 1.31 | 2.64 | -- | -- | -- | 0.627 | 9.13 | -- | -- | -- | -- |
| 673.7 | 1.21 | 15 | -0.0362 | -- | 2.44 | -- | -- | -0.296 | -- | 20.78 | 8674 | -- | -- |
| 255.97 | 0.745 | 15 | -- | 2.76 | 2.52 | -- | -- | -0.387 | 9.35 | 22.22 | 9596 | -- | -- |
| 851.16 | 1.36 | 14.8 | 1.3 | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
| 494.14 | 1.04 | 14.8 | -- | 2.64 | -- | -- | -- | 0.481 | 9.09 | -- | -- | -- | -- |
| 672.78 | 1.21 | 15 | -- | -- | 2.33 | -- | -- | -0.298 | -- | 21.83 | 8693 | -- | -- |
| 895.65 | 1.4 | 14.8 | -- | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.72 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 5 | 238.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 16 | 243.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 22 | 243.44 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 27 | 243.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 31 | 243.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 16 |
| 33 | 243.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 45 | 243.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 69 | 243.96 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 86 | 244.07 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 90 | 244.12 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 116 | 244.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 143 | 244.64 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 211 | 245.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 214 | 245.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 281 | 246.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 288 | 246.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 315 | 247.83 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 375 | 250.11 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 380 | 250.32 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 382 | 250.39 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 495 | 253.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 498 | 253.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 517 | 253.94 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 534 | 254.18 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 541 | 254.28 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 631 | 255.42 | humidity | 90 | 43200 | < th | dose independent | sin | 16 | NA |
| 700 | 255.90 | humidity | 90 | 43200 | > th | dose independent | sin | 16 | NA |
| 725 | 256.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 785 | 256.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 798 | 256.48 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 815 | 256.57 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 835 | 256.68 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 882 | 257.03 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 903 | 257.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 915 | 257.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 15 |
| 921 | 257.31 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 924 | 257.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 946 | 257.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 20 |