Os03g0196900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TFIIB-related protein (Fragment).
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Os03g0196900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TFIIB-related protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.91 | 0.225 | 10.3 | 0.639 | 1.06 | 0.258 | -0.224 | 0.738 | 0.114 | 8.16 | 21.4 | 1769 | -- | -- |
| 24.32 | 0.23 | 10.3 | 0.46 | 1.04 | 0.184 | -0.25 | -- | 0.0706 | 8.22 | 24 | 2867 | -- | -- |
| 23.03 | 0.224 | 10.3 | 0.652 | 1.07 | 0.261 | -- | 0.799 | 0.119 | 8.2 | 21.4 | 2076 | -- | -- |
| 24.53 | 0.231 | 10.3 | 0.457 | 1.05 | 0.183 | -- | -- | 0.0668 | 8.23 | 24.1 | 2868 | -- | -- |
| 83.34 | 0.428 | 10.3 | 0.525 | -- | 0.246 | -- | 0.244 | 0.0975 | -- | 21.4 | 2076 | -- | -- |
| 25.39 | 0.236 | 10.3 | 0.537 | 1.06 | -- | -0.259 | -- | 0.13 | 8.17 | -- | -- | -- | -- |
| 25.59 | 0.237 | 10.3 | 0.53 | 1.06 | -- | -- | -- | 0.13 | 8.18 | -- | -- | -- | -- |
| 83.55 | 0.428 | 10.4 | 0.466 | -- | 0.243 | -- | -- | 0.0818 | -- | 21.5 | 2910 | -- | -- |
| 25.45 | 0.235 | 10.4 | -- | 1.06 | 0.405 | -- | -- | -0.0654 | 8.21 | 21.58 | 47520 | -- | -- |
| 86.97 | 0.436 | 10.3 | 0.538 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 32.99 | 0.269 | 10.3 | -- | 1.06 | -- | -- | -- | 0.0711 | 8.14 | -- | -- | -- | -- |
| 87.36 | 0.435 | 10.4 | -- | -- | 0.413 | -- | -- | -0.0289 | -- | 19.35 | 47520 | -- | -- |
| 94.61 | 0.454 | 10.3 | -- | -- | -- | -- | -- | 0.0827 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.88 | wind | 3.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 19.88 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 3 | 19.89 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 4 | 19.91 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 11 | 20.09 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 12 | 20.11 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 24 | 20.28 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 25 | 20.28 | wind | 7.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 26 | 20.28 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 29 | 20.31 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 30 | 20.31 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 40 | 20.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 45 | 20.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 48 | 20.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 50 | 20.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 51 | 20.36 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 52 | 20.36 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 53 | 20.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 56 | 20.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 58 | 20.36 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 62 | 20.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 64 | 20.37 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 65 | 20.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 67 | 20.37 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 69 | 20.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 72 | 20.38 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 75 | 20.39 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 76 | 20.40 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 81 | 20.41 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 89 | 20.46 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 98 | 20.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 99 | 20.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 101 | 20.51 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 104 | 20.52 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 106 | 20.52 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 107 | 20.53 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 111 | 20.56 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 114 | 20.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 124 | 20.59 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 130 | 20.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 132 | 20.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 133 | 20.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 137 | 20.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 138 | 20.60 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 140 | 20.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 145 | 20.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 157 | 20.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 158 | 20.60 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 160 | 20.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 164 | 20.61 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 207 | 20.69 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 215 | 20.74 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 249 | 20.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 286 | 20.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 289 | 20.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 323 | 20.89 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 326 | 20.89 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 337 | 20.92 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 338 | 20.92 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 349 | 20.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 353 | 20.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 358 | 20.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 431 | 21.04 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 458 | 21.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 465 | 21.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 479 | 21.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 7 |
| 480 | 21.12 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 487 | 21.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 496 | 21.13 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 11 |
| 498 | 21.14 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 504 | 21.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 508 | 21.15 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 509 | 21.15 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 510 | 21.15 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 513 | 21.15 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 514 | 21.15 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 520 | 21.15 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 521 | 21.15 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 524 | 21.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 552 | 21.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 598 | 21.24 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 8 |
| 606 | 21.25 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 678 | 21.29 | wind | 9.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 689 | 21.31 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 697 | 21.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 7 |
| 700 | 21.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 705 | 21.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 22 | 7 |
| 712 | 21.33 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 22 | 7 |
| 713 | 21.33 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 725 | 21.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 17 |
| 746 | 21.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 757 | 21.36 | radiation | 1.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 792 | 21.38 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 810 | 21.40 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 811 | 21.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 818 | 21.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 858 | 21.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 860 | 21.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 861 | 21.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 863 | 21.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 865 | 21.45 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 868 | 21.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 877 | 21.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 881 | 21.45 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 910 | 21.47 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 955 | 21.50 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 973 | 21.51 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 21 | 8 |
| 985 | 21.52 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |