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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0196100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.82 (0.0285) R2 : 0.26
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.836 (0.0679) R2dC : 0.246 R2C : 0.244
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.169 (0.0599) R2dN8 : 0.0167 R2N8 : 0.0143
σ : 0.537
deviance : 131.84
__
_____
C
peak time of C : 12.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.64 0.494 3.84 -0.474 0.359 -0.589 -0.679 0.18 -0.239 12.9 19.7 28 -- --
109.93 0.488 3.84 -0.478 0.345 -0.601 -0.818 -- -0.229 12.9 19.7 23 -- --
110.46 0.49 3.84 -0.477 0.357 -0.6 -- 0.649 -0.234 13.1 19.72 23 -- --
112.73 0.495 3.84 -0.499 0.343 -0.604 -- -- -0.238 13.1 19.7 23 -- --
115.01 0.499 3.86 -0.407 -- -0.751 -- 0.912 -0.206 -- 17.57 23 -- --
122.63 0.519 3.83 -0.465 0.826 -- -0.8 -- -0.221 12.6 -- -- -- --
125.37 0.524 3.83 -0.496 0.828 -- -- -- -0.224 12.6 -- -- -- --
116.73 0.503 3.85 -0.493 -- -0.8 -- -- -0.259 -- 16.79 23 -- --
119.63 0.509 3.85 -- 0.329 -0.614 -- -- -0.227 13.1 19.7 23 -- --
168.37 0.606 3.85 -0.525 -- -- -- -- -0.239 -- -- -- -- --
131.84 0.537 3.82 -- 0.836 -- -- -- -0.169 12.6 -- -- -- --
123.26 0.517 3.84 -- -- -0.832 -- -- -0.186 -- 19.74 21 -- --
175.63 0.619 3.83 -- -- -- -- -- -0.18 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.98 temperature 30.0 270 < th dose independent rect. 7 6
7 103.94 wind 9.0 270 < th dose independent rect. 3 14
8 103.98 humidity 50.0 270 > th dose independent rect. 13 18
10 104.08 wind 9.0 270 < th dose independent rect. 13 18
11 104.12 temperature 10.0 270 > th dose independent rect. 7 6
12 104.12 atmosphere 995.0 270 > th dose independent rect. 7 6
13 104.12 atmosphere 1015.0 270 < th dose independent rect. 7 6
14 104.12 temperature 10.0 270 > th dose independent rect. 13 18
15 104.19 precipitation 0.1 270 < th dose independent rect. 7 6
16 104.19 precipitation 0.1 270 < th dose dependent rect. 7 6
17 104.20 precipitation 0.1 270 < th dose independent rect. 17 10
18 104.20 precipitation 0.1 270 < th dose dependent rect. 17 10
19 104.21 humidity 60.0 270 > th dose independent rect. 7 6
22 104.43 temperature 15.0 270 > th dose independent rect. 2 15
23 104.45 radiation 1.0 10 > th dose independent rect. 9 7
24 104.46 wind 9.0 270 < th dose independent rect. 17 10
25 104.46 radiation 30.0 90 < th dose independent rect. 15 18
27 104.59 wind 9.0 270 < th dose independent rect. 7 6
28 104.60 radiation 10.0 270 < th dose independent rect. 17 10
29 104.60 atmosphere 995.0 270 > th dose independent rect. 13 18
31 104.61 temperature 10.0 270 > th dose independent rect. 17 10
36 104.61 atmosphere 1015.0 270 < th dose independent rect. 3 14
39 104.77 wind 1.0 270 > th dose independent rect. 7 6
40 104.80 radiation 1.0 90 > th dose independent rect. 8 7
44 104.90 radiation 40.0 270 < th dose dependent rect. 17 10
49 105.01 precipitation 0.1 270 < th dose independent rect. 13 18
50 105.01 precipitation 0.1 270 < th dose dependent rect. 13 18
58 105.05 temperature 10.0 270 > th dose dependent rect. 1 7
64 105.08 atmosphere 995.0 270 > th dose independent rect. 17 10
66 105.09 atmosphere 995.0 270 > th dose dependent rect. 7 6
71 105.22 precipitation 0.1 270 < th dose independent rect. 3 14
72 105.22 precipitation 0.1 270 < th dose dependent rect. 3 14
74 105.27 temperature 30.0 270 < th dose independent rect. 20 16
81 105.37 atmosphere 995.0 10 > th dose dependent rect. 9 6
83 105.39 atmosphere 995.0 270 > th dose independent rect. 3 14
84 105.39 humidity 50.0 270 > th dose independent rect. 2 15
88 105.45 temperature 30.0 270 < th dose independent rect. 19 18
91 105.49 humidity 50.0 270 > th dose independent rect. 17 10
103 105.59 atmosphere 995.0 270 > th dose dependent rect. 8 4
119 105.71 wind 1.0 270 > th dose independent rect. 17 10
127 105.79 wind 9.0 90 < th dose independent rect. 15 17
129 105.80 radiation 40.0 10 < th dose dependent rect. 14 19
139 105.85 temperature 10.0 90 > th dose independent rect. 15 17
150 105.91 humidity 50.0 270 > th dose dependent rect. 13 18
189 106.08 atmosphere 995.0 90 > th dose independent rect. 15 17
220 106.25 radiation 40.0 270 < th dose independent rect. 9 2
221 106.26 atmosphere 995.0 270 > th dose dependent rect. 9 1
242 106.38 temperature 20.0 270 > th dose independent rect. 2 6
245 106.38 radiation 20.0 30 < th dose independent rect. 3 15
251 106.39 humidity 50.0 270 > th dose dependent rect. 1 7
253 106.40 atmosphere 1010.0 270 < th dose independent rect. 1 7
260 106.47 radiation 40.0 270 < th dose independent rect. 7 6
268 106.52 precipitation 0.1 270 < th dose independent rect. 8 17
269 106.52 precipitation 0.1 270 < th dose dependent rect. 8 17
273 106.54 temperature 30.0 270 < th dose dependent rect. 9 1
276 106.57 temperature 10.0 10 > th dose independent rect. 9 6
278 106.57 atmosphere 995.0 10 > th dose independent rect. 9 6
279 106.57 atmosphere 1015.0 10 < th dose independent rect. 9 6
280 106.57 precipitation 0.1 10 < th dose independent rect. 9 6
281 106.57 temperature 10.0 10 > th dose independent rect. 15 18
282 106.57 precipitation 0.1 10 < th dose dependent rect. 9 6
286 106.59 humidity 80.0 270 > th dose independent rect. 1 7
294 106.62 radiation 20.0 10 < th dose dependent rect. 5 13
304 106.65 humidity 50.0 90 > th dose dependent rect. 15 18
313 106.68 wind 9.0 10 < th dose independent rect. 15 18
316 106.69 wind 1.0 270 > th dose independent rect. 12 8
317 106.69 temperature 30.0 270 < th dose dependent rect. 8 3
324 106.73 radiation 20.0 30 < th dose independent rect. 3 17
325 106.73 atmosphere 995.0 10 > th dose independent rect. 15 18
330 106.76 temperature 30.0 270 < th dose dependent rect. 7 6
333 106.79 radiation 30.0 270 < th dose independent rect. 1 7
340 106.81 temperature 10.0 270 > th dose independent rect. 1 7
342 106.81 temperature 30.0 270 < th dose independent rect. 1 7
343 106.81 humidity 50.0 270 > th dose independent rect. 1 7
345 106.81 atmosphere 995.0 270 > th dose independent rect. 1 7
347 106.81 temperature 10.0 270 > th dose independent rect. 8 17
350 106.82 wind 9.0 270 < th dose independent rect. 1 7
353 106.83 humidity 50.0 270 > th dose independent rect. 13 5
392 106.94 wind 1.0 270 > th dose independent rect. 13 5
405 106.99 temperature 10.0 1440 > th dose independent rect. 10 6
410 106.99 temperature 10.0 1440 > th dose independent rect. 16 18
415 107.00 wind 9.0 270 < th dose independent rect. 12 8
419 107.01 radiation 10.0 10 < th dose independent rect. 5 13
420 107.01 radiation 20.0 30 < th dose independent rect. 5 15
423 107.05 precipitation 0.1 270 < th dose independent rect. 1 7
424 107.05 precipitation 0.1 270 < th dose independent rect. 18 19
425 107.05 precipitation 0.1 270 < th dose dependent rect. 1 7
426 107.05 precipitation 0.1 270 < th dose dependent rect. 18 19
429 107.06 humidity 50.0 270 > th dose dependent rect. 23 9
433 107.09 precipitation 0.1 270 < th dose independent rect. 20 16
435 107.09 precipitation 0.1 270 < th dose dependent rect. 20 16
441 107.13 wind 9.0 270 < th dose independent rect. 13 5
448 107.14 temperature 10.0 270 > th dose dependent rect. 2 15
454 107.16 wind 1.0 10 > th dose independent rect. 9 6
475 107.20 temperature 10.0 270 > th dose independent rect. 12 8
476 107.20 atmosphere 1015.0 270 < th dose independent rect. 12 8
477 107.20 temperature 10.0 270 > th dose independent rect. 20 16
478 107.20 atmosphere 995.0 270 > th dose independent rect. 20 16
493 107.29 temperature 10.0 270 > th dose independent rect. 13 5
495 107.29 atmosphere 1010.0 270 < th dose independent rect. 13 5
497 107.29 temperature 10.0 270 > th dose independent rect. 18 19
498 107.29 atmosphere 995.0 270 > th dose independent rect. 18 19
500 107.29 radiation 40.0 270 < th dose dependent rect. 1 7
533 107.37 wind 1.0 270 > th dose independent rect. 13 17
543 107.39 precipitation 0.1 10 < th dose independent rect. 15 18
546 107.39 precipitation 0.1 10 < th dose dependent rect. 15 18
583 107.44 radiation 40.0 270 < th dose dependent rect. 2 5
611 107.54 wind 9.0 10 < th dose independent rect. 9 6
616 107.54 atmosphere 1015.0 270 < th dose independent rect. 8 17
619 107.56 wind 9.0 270 < th dose independent rect. 20 16
643 107.60 wind 9.0 270 < th dose independent rect. 8 17
647 107.61 humidity 50.0 10 > th dose independent rect. 9 6
654 107.62 atmosphere 995.0 270 > th dose independent rect. 13 5
675 107.65 precipitation 0.1 270 < th dose independent rect. 13 5
682 107.65 precipitation 0.1 270 < th dose dependent rect. 13 5
701 107.72 atmosphere 1015.0 270 < th dose independent rect. 20 16
708 107.73 atmosphere 995.0 270 > th dose independent rect. 12 8
724 107.76 wind 9.0 270 < th dose independent rect. 18 19
728 107.77 atmosphere 1015.0 270 < th dose independent rect. 18 8
736 107.79 precipitation 0.1 270 < th dose independent rect. 12 8
739 107.79 precipitation 0.1 270 < th dose dependent rect. 12 8
744 107.80 temperature 10.0 270 > th dose dependent rect. 3 3
746 107.81 radiation 40.0 270 < th dose independent rect. 8 17
749 107.81 radiation 20.0 10 < th dose dependent rect. 5 15
791 107.90 humidity 50.0 270 > th dose independent rect. 18 19
805 107.93 radiation 10.0 10 < th dose independent sin 23 NA
812 107.95 radiation 1.0 270 > th dose independent rect. 17 21
823 107.97 atmosphere 995.0 270 > th dose independent rect. 8 17
841 108.01 temperature 10.0 10 > th dose dependent rect. 3 6
857 108.04 atmosphere 1015.0 270 < th dose independent rect. 18 19
863 108.05 humidity 50.0 270 > th dose independent rect. 20 16
866 108.05 humidity 60.0 270 > th dose dependent rect. 3 3
873 108.07 wind 9.0 270 < th dose dependent rect. 2 5
877 108.08 precipitation 0.1 270 < th dose independent rect. 6 21
880 108.08 precipitation 0.1 270 < th dose dependent rect. 6 21
887 108.10 temperature 30.0 270 < th dose independent rect. 18 9
902 108.13 radiation 20.0 10 < th dose dependent sin 23 NA
931 108.18 atmosphere 1015.0 270 < th dose independent rect. 13 18
958 108.23 radiation 10.0 270 < th dose independent rect. 3 3
991 108.28 radiation 1.0 270 < th dose independent rect. 3 15