Os03g0195300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Low affinity sulphate transporter 3.
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Os03g0195300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Low affinity sulphate transporter 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.64 | 0.741 | 10.4 | -5.85 | 1.39 | 3.03 | -1.57 | -7.25 | -0.506 | 9.46 | 20.6 | 1438 | -- | -- |
| 284.12 | 0.785 | 10.2 | -4.5 | 1.35 | 3.54 | -1.12 | -- | -0.2 | 9.34 | 11.86 | 7186 | -- | -- |
| 256.16 | 0.745 | 10.4 | -5.89 | 1.42 | 2.98 | -- | -7.22 | -0.502 | 8.96 | 20.7 | 1509 | -- | -- |
| 288.8 | 0.791 | 10.3 | -4.63 | 1.39 | 3.72 | -- | -- | -0.273 | 8.99 | 5.718 | 7351 | -- | -- |
| 371.13 | 0.897 | 10.5 | -5.84 | -- | 2.97 | -- | -7.05 | -0.474 | -- | 20.47 | 1492 | -- | -- |
| 515.14 | 1.06 | 10 | -2.68 | 1.36 | -- | -1.35 | -- | 0.731 | 8.98 | -- | -- | -- | -- |
| 520.86 | 1.07 | 10 | -2.73 | 1.38 | -- | -- | -- | 0.727 | 8.72 | -- | -- | -- | -- |
| 399.21 | 0.931 | 10.3 | -4.6 | -- | 3.67 | -- | -- | -0.245 | -- | 5.716 | 7266 | -- | -- |
| 623.96 | 1.16 | 10 | -- | 1.46 | 1.64 | -- | -- | 0.722 | 9.5 | 21.2 | 1277 | -- | -- |
| 628.05 | 1.17 | 10.1 | -2.73 | -- | -- | -- | -- | 0.739 | -- | -- | -- | -- | -- |
| 717.36 | 1.25 | 9.96 | -- | 1.37 | -- | -- | -- | 1.03 | 8.87 | -- | -- | -- | -- |
| 737 | 1.26 | 10.1 | -- | -- | 1.5 | -- | -- | 0.743 | -- | 21.2 | 1438 | -- | -- |
| 824.33 | 1.34 | 10 | -- | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.04 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 2 | 245.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 12 | 245.47 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 14 | 245.64 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 15 | 245.84 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 16 | 245.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 18 | 246.07 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 26 | 246.33 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 35 | 246.91 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 41 | 247.13 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 42 | 247.14 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 43 | 247.16 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 47 | 247.20 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 49 | 247.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 55 | 247.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 61 | 247.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 108 | 249.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 125 | 250.29 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 137 | 250.55 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 139 | 250.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 143 | 250.65 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 147 | 250.74 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 164 | 250.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 242 | 252.68 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 245 | 252.69 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 270 | 253.47 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 288 | 253.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 312 | 254.37 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 314 | 254.39 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 317 | 254.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 329 | 254.53 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 369 | 255.23 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 376 | 255.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 380 | 255.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 441 | 256.61 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 448 | 256.72 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 454 | 256.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 13 |
| 473 | 257.09 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 517 | 257.65 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 543 | 257.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 603 | 258.70 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 609 | 258.82 | temperature | 20 | 1440 | > th | dose dependent | sin | 2 | NA |
| 611 | 258.86 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 632 | 259.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 633 | 259.06 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 636 | 259.09 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 637 | 259.10 | radiation | 20 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 642 | 259.11 | radiation | 20 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 643 | 259.11 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 748 | 260.16 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 752 | 260.25 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 764 | 260.36 | wind | 7 | 43200 | > th | dose independent | sin | 1 | NA |
| 770 | 260.41 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 790 | 260.52 | temperature | 25 | 4320 | < th | dose independent | sin | 1 | NA |
| 815 | 260.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 16 |
| 819 | 260.86 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 835 | 261.06 | temperature | 25 | 4320 | > th | dose independent | sin | 1 | NA |
| 889 | 261.61 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 930 | 261.92 | wind | 7 | 43200 | < th | dose dependent | rect. | 20 | 1 |