Os03g0195200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Possible metal-binding region in RNase L inhibitor, RLI domain containing protein.
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Os03g0195200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Possible metal-binding region in RNase L inhibitor, RLI domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.85 | 0.369 | 10.1 | -0.503 | 0.538 | -0.918 | 0.229 | 0.86 | -0.0857 | 19.9 | 29.43 | 110 | -- | -- |
| 62.83 | 0.369 | 10.1 | -0.378 | 0.516 | -0.933 | 0.278 | -- | -0.0503 | 19.9 | 29 | 123 | -- | -- |
| 61.99 | 0.367 | 10.1 | -0.509 | 0.536 | -0.925 | -- | 0.867 | -0.0864 | 19.9 | 29.5 | 113 | -- | -- |
| 62.97 | 0.37 | 10.1 | -0.364 | 0.528 | -0.933 | -- | -- | -0.0478 | 20 | 29.3 | 113 | -- | -- |
| 72.78 | 0.397 | 10.1 | -0.626 | -- | -1.15 | -- | 1.01 | -0.131 | -- | 30.33 | 319 | -- | -- |
| 74.6 | 0.405 | 10.1 | -0.13 | 0.681 | -- | 0.193 | -- | 0.138 | 18.3 | -- | -- | -- | -- |
| 74.69 | 0.405 | 10.1 | -0.133 | 0.681 | -- | -- | -- | 0.139 | 18.3 | -- | -- | -- | -- |
| 73.74 | 0.4 | 10.1 | -0.45 | -- | -1.22 | -- | -- | -0.107 | -- | 29.79 | 315 | -- | -- |
| 66.15 | 0.379 | 10.1 | -- | 0.552 | -0.778 | -- | -- | 0.0195 | 19.7 | 29.39 | 103 | -- | -- |
| 98.8 | 0.464 | 10.1 | -0.151 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 75.15 | 0.406 | 10.1 | -- | 0.683 | -- | -- | -- | 0.154 | 18.3 | -- | -- | -- | -- |
| 78.31 | 0.412 | 10.1 | -- | -- | -1.06 | -- | -- | -0.0393 | -- | 29.8 | 297 | -- | -- |
| 99.39 | 0.465 | 10.1 | -- | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 16 | 57.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 54 | 59.04 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 59 | 59.14 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 21 |
| 60 | 59.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 64 | 59.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 88 | 59.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 100 | 60.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 101 | 60.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 102 | 60.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 109 | 60.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 111 | 60.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 113 | 60.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 140 | 60.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 145 | 60.33 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 203 | 60.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 256 | 60.83 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 258 | 60.83 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 270 | 60.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 272 | 60.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 280 | 60.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 291 | 60.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 301 | 60.96 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 325 | 61.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 329 | 61.03 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 15 |
| 330 | 61.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 360 | 61.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 363 | 61.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 407 | 61.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 452 | 61.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 546 | 61.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 595 | 61.86 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 666 | 62.02 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 691 | 62.08 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 705 | 62.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 718 | 62.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 720 | 62.14 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 747 | 62.19 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 772 | 62.25 | humidity | 90 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 779 | 62.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 794 | 62.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 797 | 62.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 807 | 62.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 811 | 62.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 823 | 62.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 10 |
| 830 | 62.33 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 19 |
| 833 | 62.33 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 837 | 62.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 872 | 62.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 892 | 62.38 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 21 |
| 893 | 62.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 983 | 62.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 997 | 62.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |