Os03g0194500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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Os03g0194500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.82 | 0.273 | 11.7 | 0.766 | 0.436 | 0.804 | 0.272 | 0.575 | -0.0895 | 18.9 | 23.8 | 12 | -- | -- |
| 34.33 | 0.275 | 11.7 | 0.836 | 0.436 | 0.721 | 0.255 | -- | -0.0737 | 19 | 24.02 | 11 | -- | -- |
| 33.96 | 0.271 | 11.7 | 0.758 | 0.435 | 0.784 | -- | 0.568 | -0.093 | 19.1 | 23.8 | 11 | -- | -- |
| 34.48 | 0.273 | 11.7 | 0.829 | 0.436 | 0.722 | -- | -- | -0.073 | 19.2 | 24 | 10 | -- | -- |
| 43.9 | 0.309 | 11.7 | 0.75 | -- | 0.848 | -- | 0.643 | -0.0949 | -- | 23.54 | 2 | -- | -- |
| 41.59 | 0.302 | 11.7 | 0.668 | 0.46 | -- | 0.0275 | -- | -0.19 | 20.2 | -- | -- | -- | -- |
| 41.59 | 0.302 | 11.7 | 0.667 | 0.46 | -- | -- | -- | -0.19 | 20.2 | -- | -- | -- | -- |
| 44.45 | 0.311 | 11.6 | 0.822 | -- | 0.754 | -- | -- | -0.0882 | -- | 23.78 | 2 | -- | -- |
| 50.91 | 0.334 | 11.7 | -- | 0.436 | 0.399 | -- | -- | -0.212 | 19.8 | 23.8 | 10 | -- | -- |
| 53.26 | 0.341 | 11.7 | 0.663 | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
| 53.31 | 0.342 | 11.7 | -- | 0.457 | -- | -- | -- | -0.264 | 20.3 | -- | -- | -- | -- |
| 61.07 | 0.365 | 11.7 | -- | -- | 0.487 | -- | -- | -0.211 | -- | 23.5 | 2 | -- | -- |
| 64.86 | 0.376 | 11.7 | -- | -- | -- | -- | -- | -0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 20 | 32.16 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 3 |
| 23 | 32.17 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 5 |
| 25 | 32.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 58 | 32.55 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 84 | 32.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 93 | 32.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 136 | 33.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 143 | 33.10 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 183 | 33.37 | temperature | 10 | 30 | > th | dose dependent | sin | 11 | NA |
| 197 | 33.45 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 239 | 33.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 10 |
| 250 | 33.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 252 | 33.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 14 |
| 336 | 33.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 17 |
| 355 | 34.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 356 | 34.03 | temperature | 30 | 30 | < th | dose dependent | sin | 12 | NA |
| 513 | 34.37 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 12 |
| 522 | 34.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 528 | 34.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 540 | 34.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 551 | 34.43 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 647 | 34.56 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 650 | 34.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 667 | 34.59 | temperature | 25 | 720 | > th | dose independent | sin | 15 | NA |
| 727 | 34.68 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 744 | 34.69 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 755 | 34.71 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 8 |
| 771 | 34.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 772 | 34.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 781 | 34.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 835 | 34.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 8 |
| 888 | 34.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 938 | 34.93 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |