Os03g0192900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-specific protease 26.
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Os03g0192900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-specific protease 26.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.33 | 0.259 | 9.13 | 0.495 | 1.06 | -1.4 | -0.104 | 0.549 | 0.147 | 15.2 | 8.244 | 636 | -- | -- |
| 30.56 | 0.257 | 9.14 | 0.4 | 1.06 | -1.39 | -0.103 | -- | 0.122 | 15.2 | 8.791 | 635 | -- | -- |
| 30.35 | 0.257 | 9.13 | 0.491 | 1.09 | -1.41 | -- | 0.556 | 0.147 | 15.2 | 7.948 | 600 | -- | -- |
| 30.58 | 0.258 | 9.14 | 0.394 | 1.09 | -1.4 | -- | -- | 0.122 | 15.2 | 9.728 | 601 | -- | -- |
| 78.43 | 0.412 | 9.1 | 0.723 | -- | -1.3 | -- | 0.799 | 0.207 | -- | 5.686 | 2479 | -- | -- |
| 53.93 | 0.344 | 9.18 | 0.0614 | 0.991 | -- | -0.05 | -- | -0.0899 | 13.9 | -- | -- | -- | -- |
| 53.94 | 0.344 | 9.18 | 0.0598 | 0.991 | -- | -- | -- | -0.0902 | 13.9 | -- | -- | -- | -- |
| 71.9 | 0.395 | 9.13 | 0.479 | -- | -1.58 | -- | -- | 0.156 | -- | 12.43 | 1040 | -- | -- |
| 34.21 | 0.272 | 9.15 | -- | 1.08 | -1.22 | -- | -- | 0.0552 | 15 | 12.35 | 578 | -- | -- |
| 113.35 | 0.497 | 9.19 | 0.019 | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
| 54.03 | 0.344 | 9.18 | -- | 0.99 | -- | -- | -- | -0.0969 | 13.9 | -- | -- | -- | -- |
| 77.22 | 0.409 | 9.14 | -- | -- | -1.38 | -- | -- | 0.075 | -- | 14.81 | 1030 | -- | -- |
| 113.36 | 0.497 | 9.19 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 19 |
| 3 | 29.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 19 | 30.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 62 | 30.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 65 | 30.62 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 96 | 30.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 100 | 30.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 104 | 30.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 174 | 31.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 197 | 31.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 215 | 31.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 235 | 31.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 244 | 31.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 296 | 31.48 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 328 | 31.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 541 | 31.94 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 591 | 32.05 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 813 | 32.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |