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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0192100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase S10, serine carboxypeptidase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.23 (0.0476) R2 : 0.00183
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0915 (0.1) R2dN8 : 0.00236 R2N8 : 0.00183
σ : 0.896
deviance : 368.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
341.61 0.868 3.3 -0.221 0.562 0.616 -1.54 -1.31 -0.379 5.94 25.72 162 -- --
343.63 0.87 3.26 0.163 0.422 0.482 -1.08 -- -0.241 5.66 25.6 175 -- --
346.11 0.866 3.29 -0.141 0.585 0.614 -- -0.871 -0.34 6.4 25.7 173 -- --
346.45 0.873 3.26 0.16 0.413 0.475 -- -- -0.234 5.98 25.6 252 -- --
354.6 0.877 3.26 0.0713 -- 0.415 -- -0.0806 -0.265 -- 24.14 110 -- --
360.83 0.891 3.22 0.259 0.301 -- 0.0532 -- -0.0621 10.4 -- -- -- --
360.83 0.89 3.22 0.261 0.301 -- -- -- -0.0622 10.3 -- -- -- --
353.7 0.88 3.26 0.194 -- 0.35 -- -- -0.182 -- 25.6 252 -- --
347.12 0.872 3.26 -- 0.424 0.489 -- -- -0.257 5.89 25.6 252 -- --
366.36 0.894 3.23 0.257 -- -- -- -- -0.063 -- -- -- -- --
362.63 0.891 3.23 -- 0.3 -- -- -- -0.0913 10.2 -- -- -- --
354.69 0.88 3.26 -- -- 0.359 -- -- -0.207 -- 25.6 252 -- --
368.09 0.896 3.23 -- -- -- -- -- -0.0915 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 335.55 wind 5 90 > th dose independent rect. 18 1
2 338.86 temperature 25 30 > th dose dependent rect. 19 17
4 339.67 humidity 80 90 < th dose independent rect. 19 2
8 339.84 humidity 90 90 < th dose independent rect. 2 2
12 340.18 wind 5 270 > th dose independent rect. 16 4
13 340.36 temperature 25 30 > th dose dependent rect. 22 14
17 340.66 wind 5 90 > th dose dependent rect. 18 1
19 340.76 atmosphere 1005 10 > th dose dependent rect. 3 1
21 340.97 humidity 80 10 < th dose independent rect. 20 1
27 341.12 temperature 20 720 > th dose dependent rect. 22 14
28 341.17 humidity 90 90 < th dose dependent rect. 19 4
29 341.25 temperature 25 30 > th dose dependent rect. 5 7
31 341.27 temperature 25 90 > th dose dependent rect. 2 10
43 341.40 humidity 90 90 < th dose dependent rect. 2 1
53 341.80 temperature 25 30 > th dose dependent sin 5 NA
63 341.93 temperature 25 30 > th dose dependent rect. 19 21
76 342.23 humidity 90 90 < th dose dependent rect. 19 1
95 342.47 temperature 20 720 > th dose dependent rect. 24 10
110 342.64 wind 3 270 > th dose dependent rect. 16 4
118 342.68 temperature 15 720 > th dose dependent rect. 24 3
127 342.76 wind 5 10 > th dose dependent rect. 19 4
180 343.18 wind 7 10 > th dose dependent rect. 19 10
186 343.20 temperature 25 90 < th dose independent rect. 4 22
187 343.21 temperature 25 30 > th dose dependent rect. 11 1
189 343.23 temperature 20 90 < th dose independent rect. 12 7
205 343.36 temperature 25 270 > th dose independent rect. 9 1
207 343.36 temperature 20 90 < th dose dependent rect. 12 7
216 343.42 temperature 10 720 > th dose dependent rect. 24 12
231 343.52 temperature 10 720 > th dose dependent rect. 22 14
233 343.54 wind 7 10 > th dose independent rect. 19 10
247 343.61 temperature 20 90 < th dose dependent rect. 17 2
250 343.62 temperature 20 90 < th dose independent rect. 17 2
260 343.65 temperature 25 270 > th dose independent sin 6 NA
274 343.68 wind 7 10 > th dose independent rect. 19 3
309 343.79 temperature 20 90 < th dose independent rect. 9 12
314 343.81 wind 7 10 > th dose independent rect. 19 1
317 343.81 wind 7 10 > th dose dependent rect. 19 1
354 343.94 temperature 25 270 > th dose independent rect. 5 7
356 343.95 atmosphere 1000 90 < th dose independent rect. 18 2
360 343.95 atmosphere 1000 90 < th dose dependent rect. 18 2
362 343.96 humidity 90 10 < th dose independent rect. 3 1
363 343.96 temperature 25 90 > th dose independent rect. 21 23
374 343.98 humidity 80 10 < th dose dependent rect. 20 1
377 343.98 temperature 30 30 < th dose dependent rect. 4 22
379 343.99 humidity 90 10 < th dose dependent rect. 3 1
383 344.01 temperature 25 270 > th dose independent rect. 22 14
393 344.04 temperature 25 90 < th dose independent rect. 21 20
433 344.17 temperature 20 30 > th dose dependent rect. 22 22
434 344.17 temperature 25 10 > th dose dependent rect. 15 23
473 344.34 temperature 25 90 > th dose independent rect. 18 23
494 344.39 temperature 30 90 < th dose dependent rect. 20 22
499 344.41 temperature 25 30 > th dose independent rect. 7 16
501 344.42 temperature 10 720 > th dose dependent rect. 16 20
511 344.48 temperature 20 720 > th dose independent rect. 24 3
512 344.48 temperature 25 270 > th dose independent rect. 2 10
513 344.48 temperature 20 720 > th dose dependent rect. 24 6
518 344.50 temperature 30 90 < th dose dependent rect. 23 18
567 344.67 temperature 15 720 > th dose dependent rect. 22 5
583 344.72 temperature 25 90 > th dose independent rect. 24 23
588 344.73 temperature 20 270 > th dose dependent rect. 15 22
593 344.75 temperature 10 720 > th dose dependent rect. 24 10
594 344.75 temperature 10 720 > th dose dependent rect. 16 18
615 344.80 temperature 25 90 > th dose independent rect. 14 23
651 344.91 temperature 25 30 > th dose independent rect. 7 13
705 345.10 temperature 25 90 > th dose independent rect. 6 21
717 345.12 temperature 20 30 > th dose dependent rect. 24 23
730 345.16 temperature 10 270 > th dose dependent rect. 6 14
737 345.19 temperature 25 90 < th dose independent rect. 4 13
777 345.27 atmosphere 1005 10 > th dose independent rect. 2 2
788 345.29 temperature 25 30 > th dose dependent rect. 6 17
807 345.33 temperature 30 720 < th dose dependent rect. 4 3
881 345.44 temperature 30 270 < th dose dependent rect. 21 19
956 345.56 atmosphere 995 90 > th dose dependent rect. 4 14
961 345.57 temperature 25 30 > th dose dependent no NA NA
968 345.58 atmosphere 1015 720 < th dose dependent rect. 8 1