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Os03g0191100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0161) R2 : 0.781
β1 : -0.88 (0.059) R2dD : 0.11 R2D : 0.0627
β2 : 1.54 (0.042) R2dC : 0.652 R2C : 0.612
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.415 (0.0344) R2dN8 : 0.0932 R2N8 : 0.0253
σ : 0.303
deviance : 41.93
__
_____
C
peak time of C : 6.69
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.98 0.286 12.4 -0.903 1.56 -0.58 -0.0392 -0.663 -0.33 6.76 995.2 556 -- --
37.34 0.285 12.4 -0.923 1.56 -0.617 -0.0504 -- -0.323 6.78 995.1 551 -- --
36.98 0.283 12.4 -0.904 1.56 -0.584 -- -0.643 -0.329 6.76 994.9 551 -- --
37.34 0.285 12.4 -0.925 1.56 -0.626 -- -- -0.324 6.78 994.8 548 -- --
159.51 0.588 12.4 -0.895 -- -0.75 -- -0.345 -0.283 -- 995.4 1212 -- --
41.91 0.303 12.4 -0.879 1.54 -- -0.0947 -- -0.415 6.68 -- -- -- --
41.93 0.303 12.4 -0.88 1.54 -- -- -- -0.415 6.69 -- -- -- --
159.61 0.588 12.4 -0.92 -- -0.772 -- -- -0.277 -- 992.8 1225 -- --
59.61 0.36 12.4 -- 1.55 -0.481 -- -- -0.245 6.79 993.9 499 -- --
166.25 0.602 12.4 -0.844 -- -- -- -- -0.384 -- -- -- -- --
62.33 0.369 12.4 -- 1.53 -- -- -- -0.317 6.73 -- -- -- --
181.44 0.627 12.4 -- -- -0.562 -- -- -0.206 -- 991.2 1190 -- --
185.05 0.635 12.4 -- -- -- -- -- -0.29 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.14 atmosphere 1000.0 90 > th dose independent rect. 23 19
3 29.50 atmosphere 1000.0 270 > th dose independent rect. 21 20
9 30.21 atmosphere 1015.0 270 < th dose dependent rect. 17 4
12 30.50 atmosphere 995.0 270 > th dose dependent rect. 12 14
15 30.71 atmosphere 1015.0 270 < th dose dependent rect. 16 6
23 31.23 temperature 10.0 90 > th dose dependent rect. 18 5
24 31.24 precipitation 0.1 270 < th dose independent rect. 2 10
25 31.24 precipitation 0.1 270 < th dose dependent rect. 2 10
26 31.28 radiation 10.0 90 < th dose dependent rect. 17 6
33 31.46 humidity 50.0 90 > th dose independent rect. 17 6
36 31.53 radiation 1.0 90 < th dose independent rect. 17 6
37 31.53 humidity 50.0 270 > th dose independent rect. 2 10
39 31.57 temperature 10.0 270 > th dose dependent rect. 18 2
40 31.58 atmosphere 1010.0 90 < th dose independent rect. 18 5
41 31.58 atmosphere 995.0 90 > th dose dependent rect. 23 19
42 31.62 precipitation 0.1 90 < th dose independent rect. 18 5
44 31.62 precipitation 0.1 90 < th dose dependent rect. 18 5
50 31.67 temperature 15.0 90 > th dose independent rect. 17 6
56 31.69 wind 9.0 90 < th dose independent rect. 17 6
57 31.69 wind 9.0 90 < th dose dependent rect. 17 6
62 31.74 atmosphere 995.0 270 > th dose independent rect. 12 14
72 31.81 temperature 10.0 90 > th dose independent rect. 23 18
73 31.82 temperature 10.0 270 > th dose dependent rect. 17 16
87 31.91 wind 9.0 270 < th dose independent rect. 2 10
92 31.92 atmosphere 995.0 90 > th dose independent rect. 18 5
96 31.95 temperature 10.0 270 > th dose independent rect. 2 10
97 31.95 atmosphere 995.0 270 > th dose independent rect. 2 10
98 31.95 atmosphere 1015.0 270 < th dose independent rect. 2 10
99 31.95 temperature 10.0 270 > th dose independent rect. 12 14
103 31.96 radiation 10.0 43200 < th dose dependent rect. 19 5
120 32.09 wind 1.0 90 > th dose independent rect. 17 6
125 32.12 precipitation 0.1 90 < th dose independent rect. 23 18
126 32.12 precipitation 0.1 90 < th dose dependent rect. 23 18
127 32.13 wind 1.0 270 > th dose independent rect. 17 4
131 32.16 wind 9.0 90 < th dose independent rect. 23 18
133 32.17 wind 9.0 270 < th dose independent rect. 12 14
140 32.18 temperature 10.0 270 > th dose independent rect. 21 20
141 32.18 wind 9.0 270 < th dose dependent rect. 18 2
142 32.19 precipitation 0.1 270 < th dose independent rect. 18 2
144 32.19 precipitation 0.1 270 < th dose dependent rect. 18 2
150 32.23 atmosphere 1010.0 270 < th dose independent rect. 18 2
158 32.29 atmosphere 995.0 270 > th dose dependent rect. 11 5
176 32.40 temperature 10.0 270 > th dose dependent rect. 16 19
178 32.41 radiation 10.0 270 < th dose independent rect. 18 2
211 32.50 wind 9.0 270 < th dose independent rect. 21 20
227 32.53 atmosphere 1015.0 90 < th dose independent rect. 23 18
235 32.58 humidity 50.0 270 > th dose independent rect. 22 18
256 32.69 precipitation 0.1 270 < th dose independent rect. 21 20
259 32.69 precipitation 0.1 270 < th dose dependent rect. 21 20
273 32.74 atmosphere 995.0 270 > th dose independent rect. 18 2
285 32.78 humidity 50.0 270 > th dose independent rect. 21 20
320 32.98 humidity 60.0 10 > th dose independent rect. 18 5
339 33.03 temperature 30.0 90 < th dose independent rect. 23 18
346 33.07 temperature 30.0 90 < th dose independent rect. 17 6
360 33.10 temperature 10.0 270 > th dose dependent rect. 2 9
364 33.12 temperature 30.0 10 < th dose independent rect. 18 5
367 33.12 atmosphere 995.0 270 > th dose dependent rect. 21 20
382 33.16 atmosphere 995.0 270 > th dose dependent rect. 12 3
391 33.19 radiation 1.0 1440 < th dose dependent rect. 19 5
406 33.22 precipitation 0.1 270 < th dose independent rect. 12 14
408 33.22 precipitation 0.1 270 < th dose dependent rect. 12 14
414 33.23 atmosphere 1015.0 90 < th dose dependent rect. 18 19
422 33.25 temperature 10.0 1440 > th dose independent rect. 19 5
425 33.25 temperature 30.0 1440 < th dose independent rect. 19 5
429 33.25 humidity 50.0 1440 > th dose independent rect. 19 5
431 33.25 atmosphere 995.0 1440 > th dose independent rect. 19 5
432 33.25 radiation 1.0 1440 < th dose independent rect. 19 5
452 33.25 temperature 10.0 1440 > th dose independent rect. 24 19
459 33.25 temperature 10.0 10 > th dose dependent rect. 18 6
460 33.25 humidity 50.0 90 > th dose dependent rect. 17 6
509 33.36 atmosphere 1000.0 270 > th dose independent rect. 11 5
510 33.36 precipitation 0.1 270 < th dose independent rect. 16 19
512 33.36 precipitation 0.1 270 < th dose dependent rect. 16 19
519 33.37 atmosphere 1015.0 270 < th dose dependent rect. 16 19
587 33.50 precipitation 0.1 270 < th dose independent rect. 15 22
591 33.50 precipitation 0.1 270 < th dose dependent rect. 15 22
628 33.59 atmosphere 1005.0 270 > th dose independent rect. 12 3
639 33.61 wind 3.0 270 > th dose independent rect. 11 5
657 33.66 atmosphere 1000.0 270 > th dose independent rect. 21 10
658 33.66 atmosphere 1000.0 90 > th dose independent rect. 23 10
671 33.69 precipitation 0.1 270 < th dose independent rect. 17 16
672 33.69 temperature 15.0 270 > th dose independent rect. 16 19
675 33.69 precipitation 0.1 270 < th dose dependent rect. 17 16
688 33.72 temperature 10.0 30 > th dose dependent rect. 4 10
691 33.73 temperature 30.0 270 < th dose independent rect. 18 2
695 33.73 humidity 50.0 10 > th dose dependent rect. 18 5
700 33.74 wind 1.0 90 > th dose independent rect. 23 19
712 33.77 wind 9.0 270 < th dose independent rect. 16 19
715 33.77 radiation 20.0 10 < th dose dependent rect. 23 19
730 33.81 radiation 1.0 270 < th dose independent rect. 21 18
762 33.85 humidity 90.0 270 < th dose independent rect. 18 2
763 33.85 precipitation 0.1 270 < th dose independent rect. 11 5
769 33.85 precipitation 0.1 270 < th dose dependent rect. 11 5
777 33.86 temperature 10.0 270 > th dose independent rect. 11 5
778 33.86 atmosphere 1015.0 270 < th dose independent rect. 11 5
786 33.86 radiation 30.0 270 < th dose dependent rect. 21 11
814 33.87 atmosphere 1000.0 30 > th dose independent rect. 14 14
828 33.87 radiation 10.0 90 < th dose dependent rect. 10 13
869 33.92 atmosphere 1015.0 270 < th dose independent rect. 21 20
873 33.93 wind 9.0 270 < th dose independent rect. 11 5
877 33.94 temperature 15.0 270 > th dose independent rect. 17 17
887 33.96 humidity 50.0 270 > th dose independent rect. 11 5
912 33.99 atmosphere 995.0 270 > th dose dependent rect. 21 9
948 34.04 radiation 1.0 270 < th dose dependent rect. 21 18