Os03g0190900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0190900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23 | 0.225 | 10.8 | 0.666 | 0.544 | -2.1 | 4.36 | -5.47 | 0.228 | 17.8 | 0.6698 | 714 | -- | -- |
| 27.69 | 0.245 | 10.8 | 0.77 | 0.443 | -2.11 | 0.298 | -- | 0.232 | 19.4 | 1.566 | 766 | -- | -- |
| 28.17 | 0.247 | 10.8 | 0.712 | 0.418 | -2.09 | -- | -0.435 | 0.292 | 20.5 | 1.626 | 790 | -- | -- |
| 26.31 | 0.239 | 10.8 | 0.731 | 0.0504 | -1.5 | -- | -- | 0.273 | 22.1 | 1.74 | 721 | -- | -- |
| 26.14 | 0.238 | 10.8 | 0.724 | -- | -1.42 | -- | -0.231 | 0.277 | -- | 1.8 | 694 | -- | -- |
| 30.17 | 0.257 | 10.8 | 0.661 | 1.17 | -- | 0.0726 | -- | 0.208 | 5.56 | -- | -- | -- | -- |
| 30.18 | 0.257 | 10.8 | 0.661 | 1.17 | -- | -- | -- | 0.208 | 5.56 | -- | -- | -- | -- |
| 26.23 | 0.239 | 10.8 | 0.734 | -- | -1.43 | -- | -- | 0.279 | -- | 1.803 | 695 | -- | -- |
| 39.01 | 0.291 | 10.8 | -- | 0.384 | -0.934 | -- | -- | 0.174 | 7.13 | 3.777 | 604 | -- | -- |
| 100.94 | 0.469 | 10.8 | 0.699 | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
| 41.7 | 0.302 | 10.8 | -- | 1.18 | -- | -- | -- | 0.134 | 5.54 | -- | -- | -- | -- |
| 40 | 0.295 | 10.8 | -- | -- | -1.43 | -- | -- | 0.193 | -- | 4.96 | 694 | -- | -- |
| 113.83 | 0.498 | 10.8 | -- | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 9 | 22.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 10 | 22.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 11 | 22.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 17 | 22.61 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 34 | 22.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 41 | 23.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 42 | 23.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 44 | 23.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 56 | 23.12 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 63 | 23.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 71 | 23.21 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 73 | 23.24 | radiation | 10.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 74 | 23.24 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 78 | 23.25 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 86 | 23.27 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 12 | 20 |
| 95 | 23.28 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 104 | 23.31 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 130 | 23.35 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 167 | 23.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 170 | 23.39 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 171 | 23.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 191 | 23.42 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 200 | 23.43 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 201 | 23.43 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 209 | 23.44 | temperature | 30.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 214 | 23.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 219 | 23.45 | temperature | 30.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 220 | 23.45 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 221 | 23.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 224 | 23.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 230 | 23.45 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 261 | 23.47 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 262 | 23.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 264 | 23.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 267 | 23.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 271 | 23.49 | radiation | 1.0 | 720 | < th | dose dependent | sin | 0 | NA |
| 292 | 23.52 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 293 | 23.53 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 295 | 23.53 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 302 | 23.53 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 303 | 23.53 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 306 | 23.54 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 311 | 23.54 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 314 | 23.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 315 | 23.55 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 325 | 23.56 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 332 | 23.57 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 363 | 23.60 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 375 | 23.61 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 424 | 23.62 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 449 | 23.63 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 493 | 23.65 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 531 | 23.66 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 537 | 23.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 541 | 23.67 | radiation | 1.0 | 720 | < th | dose independent | sin | 12 | NA |
| 542 | 23.67 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 548 | 23.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 551 | 23.67 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 596 | 23.70 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 602 | 23.70 | temperature | 25.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 605 | 23.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 620 | 23.71 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 633 | 23.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 642 | 23.72 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 713 | 23.74 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 714 | 23.74 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 715 | 23.74 | radiation | 1.0 | 720 | > th | dose independent | sin | 12 | NA |
| 719 | 23.74 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 720 | 23.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 924 | 23.75 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 959 | 23.75 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 961 | 23.75 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 23 |