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Os03g0190300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0367) R2 : 0.615
β1 : 1.81 (0.134) R2dD : 0.158 R2D : 0.129
β2 : 2.67 (0.112) R2dC : 0.676 R2C : 0.236
β3 : -1.86 (0.129) R2dE : 0.252 R2E : -0.226
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.0785) R2dN8 : 0.00167 R2N8 : -0.0117
σ : 0.681
deviance : 213.97
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C
peak time of C : 6.95
E
wheather : temperature
threshold : 6.416
memory length : 109
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 23.7
open length of G : 17.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
202.96 0.669 10.5 1.9 2.68 -1.91 0.82 1.73 0.137 7.02 7.029 109 23.8 17.1
207.15 0.67 10.5 1.81 2.68 -1.95 1.7 -- 0.129 7.09 7.045 107 23.8 17.1
204.23 0.666 10.5 1.94 2.67 -1.89 -- 2.19 0.149 7.01 6.227 102 23.8 17.2
213.97 0.681 10.5 1.81 2.67 -1.86 -- -- 0.101 6.95 6.416 109 23.7 17.2
263.58 0.756 10.5 1.94 -- -2.54 -- 0.623 0.142 -- 5.021 548 3.6 18.3
258.38 0.754 10.5 1.59 2.05 -- 0.681 -- -0.0744 5.26 -- -- -- --
259.49 0.754 10.5 1.59 2.05 -- -- -- -0.0778 5.2 -- -- -- --
249.52 0.736 10.5 1.7 -- -2.44 -- -- 0.182 -- -24.54 807 0.817 18
295.36 0.8 10.5 -- 2.63 -1.46 -- -- -0.0373 6.67 2.334 65 24 17.4
479.16 1.02 10.6 1.66 -- -- -- -- -0.0262 -- -- -- -- --
325.82 0.844 10.6 -- 2.08 -- -- -- -0.254 5.17 -- -- -- --
327.9 0.843 10.6 -- -- -2.48 -- -- -0.3 -- -30.9 739 3.3 15.4
551.7 1.1 10.6 -- -- -- -- -- -0.21 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.94 temperature 10.0 90 > th dose dependent rect. 24 17
2 204.55 temperature 30.0 90 < th dose dependent rect. 17 18
5 206.20 temperature 10.0 270 > th dose dependent rect. 22 18
23 208.41 temperature 10.0 270 > th dose dependent rect. 20 21
40 210.28 atmosphere 1015.0 90 < th dose dependent rect. 24 17
61 212.05 temperature 20.0 270 > th dose independent rect. 22 18
62 212.06 radiation 1.0 30 < th dose dependent rect. 17 7
80 213.22 humidity 50.0 10 > th dose dependent rect. 17 7
83 213.37 temperature 15.0 90 > th dose independent rect. 24 17
86 213.44 radiation 1.0 30 < th dose independent rect. 17 7
90 213.64 temperature 15.0 30 > th dose dependent rect. 20 23
98 213.93 temperature 30.0 270 < th dose independent rect. 2 9
101 214.04 temperature 15.0 90 > th dose dependent rect. 7 22
105 214.21 wind 9.0 90 < th dose independent rect. 24 17
117 214.53 atmosphere 1010.0 10 < th dose independent rect. 24 17
119 214.68 temperature 30.0 10 < th dose dependent rect. 17 7
134 215.05 temperature 10.0 30 > th dose dependent rect. 13 16
143 215.35 precipitation 0.1 90 < th dose independent rect. 24 17
144 215.35 precipitation 0.1 90 < th dose dependent rect. 24 17
155 215.67 temperature 30.0 90 < th dose dependent rect. 5 19
158 215.77 temperature 30.0 90 < th dose independent rect. 5 8
167 215.99 temperature 30.0 90 < th dose dependent rect. 3 21
178 216.18 temperature 10.0 90 > th dose independent rect. 17 7
185 216.26 wind 9.0 90 < th dose independent rect. 17 7
187 216.27 temperature 10.0 270 > th dose dependent rect. 11 15
188 216.31 humidity 50.0 90 > th dose independent rect. 17 7
189 216.37 atmosphere 995.0 90 > th dose independent rect. 24 17
202 216.69 wind 9.0 10 < th dose independent rect. 24 17
208 216.75 atmosphere 995.0 90 > th dose dependent rect. 5 8
209 216.76 atmosphere 995.0 90 > th dose independent rect. 17 7
230 217.21 temperature 15.0 10 > th dose dependent rect. 22 21
242 217.52 temperature 15.0 270 > th dose independent rect. 11 15
245 217.57 humidity 50.0 10 > th dose independent rect. 24 17
266 217.97 temperature 20.0 10 > th dose independent rect. 24 17
294 218.34 humidity 50.0 90 > th dose independent rect. 24 17
302 218.40 atmosphere 1015.0 270 < th dose dependent rect. 22 17
310 218.52 temperature 15.0 30 > th dose dependent rect. 13 23
359 219.13 temperature 10.0 1440 > th dose independent rect. 18 7
362 219.13 humidity 50.0 1440 > th dose independent rect. 18 7
365 219.13 radiation 20.0 1440 < th dose independent rect. 18 7
377 219.13 temperature 10.0 1440 > th dose independent rect. 1 17
392 219.38 precipitation 0.1 90 < th dose independent rect. 17 7
393 219.38 precipitation 0.1 90 < th dose dependent rect. 17 7
411 219.55 temperature 15.0 270 > th dose dependent rect. 22 5
413 219.58 wind 9.0 270 < th dose independent rect. 12 14
428 219.70 temperature 20.0 270 > th dose independent rect. 22 5
436 219.77 precipitation 0.1 270 < th dose independent rect. 12 14
437 219.77 precipitation 0.1 270 < th dose dependent rect. 12 14
440 219.79 wind 9.0 10 < th dose dependent rect. 17 7
450 219.88 temperature 10.0 270 > th dose independent rect. 2 10
451 219.88 atmosphere 995.0 270 > th dose independent rect. 2 10
452 219.88 atmosphere 1015.0 270 < th dose independent rect. 2 10
469 219.98 precipitation 0.1 270 < th dose independent rect. 2 10
470 219.98 precipitation 0.1 270 < th dose dependent rect. 2 10
471 219.99 temperature 30.0 30 < th dose independent rect. 17 7
475 220.05 radiation 1.0 30 < th dose dependent rect. 6 18
483 220.18 precipitation 0.1 10 < th dose independent rect. 17 7
484 220.18 precipitation 0.1 10 < th dose dependent rect. 17 7
485 220.18 atmosphere 995.0 270 > th dose dependent rect. 2 9
489 220.21 radiation 1.0 90 < th dose independent rect. 10 14
497 220.24 wind 1.0 90 > th dose independent rect. 17 7
501 220.25 precipitation 0.1 90 < th dose independent rect. 13 16
502 220.25 precipitation 0.1 90 < th dose dependent rect. 13 16
505 220.27 wind 9.0 270 < th dose independent rect. 22 18
510 220.35 temperature 15.0 270 > th dose dependent rect. 21 7
579 220.95 temperature 20.0 270 > th dose independent rect. 23 3
581 220.97 temperature 15.0 270 > th dose dependent rect. 23 3
587 221.02 temperature 20.0 90 > th dose independent rect. 13 16
618 221.23 atmosphere 1015.0 270 < th dose dependent rect. 7 9
619 221.24 atmosphere 995.0 270 > th dose independent rect. 22 18
621 221.28 wind 1.0 10 > th dose independent rect. 17 7
627 221.30 atmosphere 1015.0 270 < th dose independent rect. 22 18
635 221.33 wind 9.0 270 < th dose independent rect. 2 9
644 221.41 humidity 50.0 270 > th dose independent rect. 2 9
652 221.43 atmosphere 1015.0 90 < th dose dependent rect. 9 9
783 222.12 temperature 10.0 270 > th dose dependent rect. 7 9
788 222.14 precipitation 0.1 270 < th dose independent rect. 22 18
789 222.14 precipitation 0.1 270 < th dose dependent rect. 22 18
797 222.17 atmosphere 1015.0 10 < th dose dependent rect. 8 11
803 222.22 atmosphere 1015.0 90 < th dose independent rect. 17 7
867 222.58 radiation 1.0 1440 < th dose dependent rect. 19 6
902 222.82 radiation 20.0 4320 < th dose dependent rect. 19 6
912 222.86 radiation 1.0 90 < th dose independent rect. 5 19
920 222.87 temperature 30.0 1440 < th dose independent rect. 19 6
926 222.87 atmosphere 995.0 1440 > th dose independent rect. 19 6
927 222.87 radiation 1.0 1440 < th dose independent rect. 19 6
954 222.89 radiation 10.0 10 < th dose dependent rect. 24 17
965 222.97 temperature 30.0 270 < th dose dependent rect. 3 8
998 223.08 temperature 10.0 270 > th dose independent rect. 15 8