Os03g0189400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alcohol dehydrogenase ADH.
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Os03g0189400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alcohol dehydrogenase ADH.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384.02 | 0.921 | 10.4 | 1.32 | 3.08 | 2.55 | 1.2 | -0.0828 | 0.656 | 4.15 | 70.99 | 1241 | -- | -- |
| 383.99 | 0.913 | 10.4 | 1.3 | 3.08 | 2.55 | 1.22 | -- | 0.65 | 4.12 | 70.91 | 1234 | -- | -- |
| 387.75 | 0.917 | 10.4 | 1.34 | 3.09 | 2.55 | -- | -0.345 | 0.656 | 4.19 | 70.94 | 1232 | -- | -- |
| 387.95 | 0.917 | 10.4 | 1.28 | 3.09 | 2.53 | -- | -- | 0.644 | 4.2 | 70.95 | 1236 | -- | -- |
| 538.3 | 1.08 | 10.5 | 0.747 | -- | 2.53 | -- | 1.32 | 0.512 | -- | 75 | 419 | -- | -- |
| 617.13 | 1.16 | 10.5 | 0.724 | 2.74 | -- | 0.421 | -- | 0.3 | 4.79 | -- | -- | -- | -- |
| 617.57 | 1.16 | 10.5 | 0.722 | 2.74 | -- | -- | -- | 0.297 | 4.81 | -- | -- | -- | -- |
| 533.23 | 1.08 | 10.5 | 0.965 | -- | 2.93 | -- | -- | 0.514 | -- | 74.43 | 439 | -- | -- |
| 430.16 | 0.966 | 10.4 | -- | 3.1 | 2.47 | -- | -- | 0.613 | 4.16 | 71 | 1229 | -- | -- |
| 1014.13 | 1.49 | 10.5 | 0.824 | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
| 631.31 | 1.18 | 10.5 | -- | 2.75 | -- | -- | -- | 0.217 | 4.8 | -- | -- | -- | -- |
| 557.71 | 1.1 | 10.5 | -- | -- | 2.91 | -- | -- | 0.406 | -- | 74.39 | 440 | -- | -- |
| 1032.06 | 1.5 | 10.6 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 385.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 9 | 386.23 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 10 | 386.41 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 30 | 387.50 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 35 | 387.70 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 57 | 388.36 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 68 | 388.60 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 75 | 388.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 77 | 388.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 13 |
| 79 | 388.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 84 | 388.81 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 17 |
| 86 | 388.81 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 99 | 388.95 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 104 | 388.96 | temperature | 30 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 133 | 389.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 153 | 389.06 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 161 | 389.16 | humidity | 60 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 190 | 389.27 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 205 | 389.31 | temperature | 25 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 210 | 389.33 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 16 |
| 218 | 389.37 | temperature | 30 | 14400 | < th | dose independent | sin | 21 | NA |
| 274 | 389.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 275 | 389.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 278 | 389.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 279 | 389.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 300 | 389.58 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 321 | 389.59 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 338 | 389.60 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 387 | 389.61 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 425 | 389.67 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 453 | 389.73 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 461 | 389.74 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 482 | 389.78 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 510 | 389.92 | temperature | 30 | 14400 | > th | dose independent | sin | 20 | NA |
| 521 | 389.93 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 618 | 390.26 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 779 | 390.41 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 832 | 390.65 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |