Os03g0188000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0188000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.88 | 0.508 | 7.87 | 1.33 | 1.5 | -1.92 | 0.908 | 0.332 | -0.0203 | 8.25 | 22.21 | 2117 | -- | -- |
| 115.1 | 0.5 | 7.88 | 1.16 | 1.63 | -1.94 | 0.964 | -- | -0.0711 | 8.25 | 22.1 | 1421 | -- | -- |
| 119.37 | 0.509 | 7.88 | 1.32 | 1.5 | -1.92 | -- | 0.197 | -0.0316 | 8.27 | 22.21 | 2106 | -- | -- |
| 118.17 | 0.506 | 7.89 | 1.16 | 1.62 | -1.93 | -- | -- | -0.0844 | 8.23 | 22.1 | 1406 | -- | -- |
| 241.27 | 0.723 | 7.9 | 1.42 | -- | -2.08 | -- | 0.249 | 0.0545 | -- | 22.26 | 2216 | -- | -- |
| 250.57 | 0.742 | 8.03 | 0.438 | 1.61 | -- | 0.907 | -- | -0.724 | 8.45 | -- | -- | -- | -- |
| 253.18 | 0.745 | 8.03 | 0.466 | 1.61 | -- | -- | -- | -0.724 | 8.48 | -- | -- | -- | -- |
| 212.03 | 0.678 | 7.92 | 1.26 | -- | -2.13 | -- | -- | 0.0494 | -- | 21.9 | 777 | -- | -- |
| 147.74 | 0.566 | 7.94 | -- | 1.54 | -1.59 | -- | -- | -0.281 | 7.96 | 22.3 | 1163 | -- | -- |
| 398.37 | 0.933 | 8.08 | 0.474 | -- | -- | -- | -- | -0.708 | -- | -- | -- | -- | -- |
| 258.91 | 0.753 | 8.05 | -- | 1.61 | -- | -- | -- | -0.776 | 8.46 | -- | -- | -- | -- |
| 244.65 | 0.728 | 7.97 | -- | -- | -1.79 | -- | -- | -0.225 | -- | 22.25 | 760 | -- | -- |
| 404.29 | 0.939 | 8.09 | -- | -- | -- | -- | -- | -0.761 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 19 | 123.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 49 | 124.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 52 | 124.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 54 | 124.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 82 | 124.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 88 | 125.03 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 91 | 125.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 112 | 125.17 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 158 | 125.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 252 | 126.27 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 262 | 126.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 304 | 126.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 516 | 127.69 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 669 | 128.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 691 | 128.60 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 784 | 129.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 790 | 129.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |