Os03g0183700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0183700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.71 | 0.505 | 2.93 | -0.539 | 0.156 | 6.36 | 0.325 | -39.1 | 0.0385 | 3.95 | 33.98 | 75 | -- | -- |
| 124.46 | 0.524 | 2.88 | -0.162 | 0.132 | 1.76 | 0.333 | -- | 0.0332 | 3.59 | 33.98 | 75 | -- | -- |
| 115.84 | 0.501 | 2.93 | -0.541 | 0.163 | 6.67 | -- | -41.1 | 0.0288 | 4.5 | 34.06 | 76 | -- | -- |
| 123.2 | 0.517 | 2.88 | -0.168 | 0.147 | 1.63 | -- | -- | 0.0341 | 3.43 | 33.9 | 50 | -- | -- |
| 117.14 | 0.504 | 2.93 | -0.518 | -- | 6.57 | -- | -41 | 0.0374 | -- | 34.1 | 76 | -- | -- |
| 129.61 | 0.534 | 2.88 | -0.146 | 0.0981 | -- | 0.244 | -- | 0.0236 | 3.73 | -- | -- | -- | -- |
| 129.7 | 0.533 | 2.88 | -0.15 | 0.11 | -- | -- | -- | 0.0221 | 5.07 | -- | -- | -- | -- |
| 124.31 | 0.519 | 2.88 | -0.165 | -- | 1.61 | -- | -- | 0.0387 | -- | 34 | 50 | -- | -- |
| 123.85 | 0.518 | 2.88 | -- | 0.152 | 1.61 | -- | -- | 0.0523 | 4.67 | 33.9 | 50 | -- | -- |
| 130.33 | 0.533 | 2.88 | -0.146 | -- | -- | -- | -- | 0.0248 | -- | -- | -- | -- | -- |
| 130.29 | 0.534 | 2.88 | -- | 0.107 | -- | -- | -- | 0.0387 | 5.12 | -- | -- | -- | -- |
| 125.03 | 0.521 | 2.88 | -- | -- | 1.57 | -- | -- | 0.0549 | -- | 34 | 50 | -- | -- |
| 130.89 | 0.534 | 2.88 | -- | -- | -- | -- | -- | 0.041 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.98 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 42 | 116.98 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 84 | 117.09 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 153 | 119.71 | humidity | 50.0 | 10 | < th | dose independent | sin | 6 | NA |
| 187 | 122.37 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 190 | 122.52 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 214 | 122.74 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 259 | 123.21 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 261 | 123.26 | wind | 5.0 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 263 | 123.31 | wind | 5.0 | 10 | > th | dose independent | rect. | 21 | 1 |
| 265 | 123.31 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 283 | 123.72 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 2 |
| 294 | 123.80 | humidity | 50.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 418 | 124.62 | temperature | 30.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 424 | 124.70 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 425 | 124.71 | temperature | 30.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 427 | 124.73 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 432 | 124.81 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 461 | 124.93 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 466 | 124.97 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 472 | 125.01 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 476 | 125.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 483 | 125.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 519 | 125.10 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 542 | 125.13 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 555 | 125.19 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 613 | 125.31 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 638 | 125.32 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 661 | 125.36 | temperature | 30.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 669 | 125.37 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 20 |
| 678 | 125.38 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 679 | 125.38 | wind | 1.0 | 90 | < th | dose dependent | rect. | 1 | 11 |
| 680 | 125.39 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 683 | 125.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 685 | 125.39 | wind | 3.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 705 | 125.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 706 | 125.40 | temperature | 30.0 | 10 | > th | dose dependent | sin | 17 | NA |
| 733 | 125.42 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 747 | 125.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 751 | 125.43 | temperature | 25.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 789 | 125.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 795 | 125.45 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 797 | 125.46 | humidity | 60.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 800 | 125.46 | radiation | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 812 | 125.46 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 822 | 125.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 20 |
| 891 | 125.50 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 896 | 125.51 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 897 | 125.51 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 914 | 125.52 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 915 | 125.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 918 | 125.52 | humidity | 90.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 919 | 125.52 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 922 | 125.52 | radiation | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 923 | 125.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 1 |
| 926 | 125.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 930 | 125.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 936 | 125.53 | wind | 9.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 939 | 125.53 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 940 | 125.53 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 960 | 125.54 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 962 | 125.54 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 965 | 125.54 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 985 | 125.55 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 989 | 125.55 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 995 | 125.55 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 10 | 8 |