Os03g0183300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0183300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.85 | 0.415 | 15.3 | 1.37 | 1.53 | -1.23 | -0.297 | 1.95 | 0.229 | 23.9 | 26.73 | 1718 | -- | -- |
| 78.48 | 0.413 | 15.3 | 0.95 | 1.52 | -0.995 | -0.32 | -- | 0.142 | 24 | 26.7 | 1697 | -- | -- |
| 78.22 | 0.412 | 15.3 | 1.4 | 1.53 | -1.24 | -- | 2.02 | 0.227 | 23.9 | 26.8 | 1710 | -- | -- |
| 78.84 | 0.414 | 15.3 | 0.962 | 1.53 | -1.01 | -- | -- | 0.144 | 23.9 | 26.73 | 1700 | -- | -- |
| 182.53 | 0.633 | 15.2 | 1.3 | -- | -2.17 | -- | 4.25 | 0.245 | -- | 26.6 | 1664 | -- | -- |
| 112.86 | 0.498 | 15.3 | 0.658 | 1.49 | -- | -0.389 | -- | 0.118 | 0.104 | -- | -- | -- | -- |
| 113.51 | 0.499 | 15.3 | 0.673 | 1.5 | -- | -- | -- | 0.12 | 0.0898 | -- | -- | -- | -- |
| 162.21 | 0.596 | 15.2 | 1.09 | -- | -1.96 | -- | -- | 0.452 | -- | 21.08 | 12 | -- | -- |
| 101.45 | 0.469 | 15.4 | -- | 1.55 | -0.851 | -- | -- | -0.0195 | 0.0157 | 27.9 | 1710 | -- | -- |
| 254.41 | 0.745 | 15.3 | 0.721 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 125.46 | 0.524 | 15.3 | -- | 1.51 | -- | -- | -- | 0.0449 | 0.115 | -- | -- | -- | -- |
| 191.9 | 0.647 | 15.2 | -- | -- | -1.76 | -- | -- | 0.293 | -- | 21.7 | 8 | -- | -- |
| 268.11 | 0.764 | 15.3 | -- | -- | -- | -- | -- | 0.0615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.63 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 77.66 | radiation | 40 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 6 | 78.03 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 41 | 78.56 | temperature | 30 | 14400 | > th | dose dependent | sin | 12 | NA |
| 42 | 78.58 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 76 | 78.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 123 | 79.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 141 | 79.06 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 163 | 79.23 | radiation | 40 | 1440 | < th | dose dependent | rect. | 19 | 11 |
| 221 | 79.47 | radiation | 40 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 243 | 79.56 | temperature | 30 | 14400 | > th | dose independent | sin | 12 | NA |
| 244 | 79.56 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 247 | 79.58 | temperature | 30 | 14400 | < th | dose independent | sin | 12 | NA |
| 276 | 79.68 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 314 | 79.75 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 428 | 79.87 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 440 | 79.92 | radiation | 30 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 464 | 79.98 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 467 | 80.00 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 509 | 80.14 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 510 | 80.15 | radiation | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 539 | 80.20 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 554 | 80.22 | temperature | 10 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 558 | 80.23 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 559 | 80.23 | radiation | 20 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 564 | 80.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 566 | 80.27 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 603 | 80.37 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 613 | 80.42 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 635 | 80.45 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 669 | 80.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 685 | 80.50 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 732 | 80.54 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 826 | 80.54 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 853 | 80.59 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 953 | 80.61 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 957 | 80.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 978 | 80.63 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 9 |