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Os03g0183200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0452) R2 : 0.775
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.63 (0.124) R2dC : 0.292 R2C : 0.536
β3 : -3.67 (0.197) R2dE : 0.232 R2E : 0.482
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.13 (0.0968) R2dN8 : 0.00149 R2N8 : 0.00564
σ : 0.844
deviance : 328.4
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C
peak time of C : 1.63
E
wheather : temperature
threshold : 23.05
memory length : 209
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.1
open length of G : 21.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
310.53 0.828 12.7 0.952 2.58 -4.07 -0.952 2.26 0.0312 1.45 23.21 238 20 21.6
313 0.824 12.7 0.767 2.53 -3.89 -1.05 -- -0.012 1.42 23.04 221 20.1 21.7
313.24 0.824 12.6 1.08 2.59 -4.04 -- 2.98 0.0585 1.52 23.1 224 20 21.7
317.57 0.83 12.7 0.681 2.57 -3.84 -- -- -0.0554 1.63 23 208 20.1 21.6
390.35 0.92 12.6 1.33 -- -5.48 -- 2.13 0.088 -- 19.01 118 7.39 10.9
547.4 1.1 12.8 -0.0677 3.88 -- -0.666 -- -0.554 2.36 -- -- -- --
549.02 1.1 12.8 -0.0494 3.88 -- -- -- -0.55 2.35 -- -- -- --
366.85 0.892 12.7 0.641 -- -5.06 -- -- -0.325 -- 15.96 178 6.71 11
328.4 0.844 12.7 -- 2.63 -3.67 -- -- -0.13 1.63 23.05 209 20.1 21.6
1439.85 1.77 12.8 0.114 -- -- -- -- -0.455 -- -- -- -- --
549.08 1.1 12.8 -- 3.88 -- -- -- -0.545 2.35 -- -- -- --
372.09 0.898 12.8 -- -- -4.92 -- -- -0.431 -- 12.92 240 6.57 10.6
1440.2 1.77 12.8 -- -- -- -- -- -0.468 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 315.44 temperature 30 14400 > th dose dependent rect. 15 1
4 316.42 temperature 30 14400 > th dose independent rect. 16 2
5 316.63 temperature 30 14400 < th dose independent rect. 16 2
41 318.44 temperature 30 14400 < th dose independent rect. 16 8
42 318.45 temperature 30 14400 > th dose dependent sin 13 NA
49 318.60 temperature 30 14400 < th dose independent rect. 16 16
128 319.96 temperature 30 14400 < th dose independent sin 13 NA
130 320.03 temperature 30 14400 > th dose independent sin 13 NA
163 320.68 temperature 30 14400 > th dose independent rect. 10 8
167 320.77 temperature 30 14400 < th dose independent rect. 10 8
168 320.77 temperature 30 14400 < th dose independent rect. 15 21
169 320.78 temperature 30 14400 < th dose independent rect. 10 14
177 320.82 temperature 30 14400 < th dose independent rect. 10 22
179 320.83 temperature 30 14400 < th dose independent rect. 10 20
274 321.31 temperature 30 14400 > th dose independent rect. 15 21
339 321.64 temperature 30 14400 < th dose independent rect. 19 23
344 321.66 temperature 30 14400 < th dose independent rect. 5 13
350 321.67 temperature 30 14400 < th dose independent rect. 7 11
354 321.67 temperature 30 14400 < th dose independent rect. 5 19
379 321.69 temperature 30 14400 < th dose independent rect. 7 16
433 321.73 temperature 30 14400 < th dose independent no NA NA
455 321.74 temperature 30 14400 < th dose independent rect. 22 23
502 322.04 temperature 30 14400 > th dose independent no NA NA
627 322.28 temperature 30 14400 < th dose independent rect. 17 23
676 322.60 temperature 30 14400 > th dose independent rect. 17 23
723 322.88 temperature 30 14400 > th dose dependent no NA NA
995 325.12 temperature 25 270 > th dose dependent rect. 20 21