Os03g0183100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SAP-like protein BP-73 (OsBP-73) (Riaa1).
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Os03g0183100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SAP-like protein BP-73 (OsBP-73) (Riaa1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.66 | 0.51 | 9.62 | 0.264 | 1.57 | 1.13 | 0.0423 | -1.74 | -0.087 | 21.3 | 69.91 | 79 | -- | -- |
| 126.74 | 0.524 | 9.62 | 0.144 | 1.53 | 1.02 | -0.555 | -- | -0.113 | 21.6 | 71.12 | 54 | -- | -- |
| 117.46 | 0.505 | 9.62 | 0.259 | 1.55 | 1.17 | -- | -1.62 | -0.08 | 21.2 | 70.08 | 68 | -- | -- |
| 128.06 | 0.527 | 9.61 | 0.189 | 1.52 | 1.07 | -- | -- | -0.107 | 21.4 | 69.75 | 52 | -- | -- |
| 227.22 | 0.706 | 9.58 | 0.252 | -- | 1.6 | -- | -1.86 | -0.0956 | -- | 63.65 | 15 | -- | -- |
| 152.88 | 0.58 | 9.64 | 0.169 | 1.85 | -- | -0.756 | -- | -0.205 | 23.3 | -- | -- | -- | -- |
| 155.3 | 0.584 | 9.64 | 0.2 | 1.86 | -- | -- | -- | -0.202 | 23.2 | -- | -- | -- | -- |
| 238.85 | 0.723 | 9.57 | 0.189 | -- | 1.52 | -- | -- | -0.0975 | -- | 64.96 | 11 | -- | -- |
| 128.98 | 0.529 | 9.62 | -- | 1.52 | 1.07 | -- | -- | -0.125 | 21.4 | 70.22 | 52 | -- | -- |
| 371.25 | 0.9 | 9.59 | 0.246 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 156.36 | 0.585 | 9.64 | -- | 1.86 | -- | -- | -- | -0.224 | 23.2 | -- | -- | -- | -- |
| 239.58 | 0.721 | 9.58 | -- | -- | 1.55 | -- | -- | -0.126 | -- | 64.01 | 2 | -- | -- |
| 372.84 | 0.901 | 9.6 | -- | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.17 | humidity | 70.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 10 | 116.33 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 14 | 117.11 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 17 | 117.18 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 18 | 117.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 20 | 117.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 25 | 117.75 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 28 | 117.90 | humidity | 70.0 | 90 | > th | dose dependent | no | NA | NA |
| 29 | 117.90 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 32 | 117.97 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 34 | 118.00 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 38 | 118.14 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 40 | 118.16 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 16 |
| 43 | 118.19 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 45 | 118.29 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 47 | 118.31 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 49 | 118.41 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 50 | 118.41 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 51 | 118.45 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 53 | 118.47 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 55 | 118.50 | humidity | 80.0 | 30 | > th | dose independent | sin | 2 | NA |
| 56 | 118.50 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 58 | 118.53 | humidity | 80.0 | 30 | < th | dose independent | sin | 1 | NA |
| 59 | 118.56 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 71 | 118.85 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 90 | 119.11 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 91 | 119.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 94 | 119.13 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 96 | 119.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 101 | 119.25 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 107 | 119.36 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 122 | 119.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 133 | 119.66 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 134 | 119.67 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 139 | 119.71 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 167 | 119.97 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 168 | 119.97 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 169 | 119.98 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 177 | 120.03 | wind | 7.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 183 | 120.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 188 | 120.15 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 193 | 120.17 | wind | 7.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 196 | 120.18 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 204 | 120.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 205 | 120.22 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 218 | 120.30 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 231 | 120.35 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 233 | 120.36 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 243 | 120.41 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 245 | 120.42 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 256 | 120.46 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 266 | 120.51 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 276 | 120.55 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 278 | 120.56 | temperature | 30.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 306 | 120.66 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 345 | 120.75 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 353 | 120.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 354 | 120.79 | wind | 7.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 360 | 120.80 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 362 | 120.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 363 | 120.81 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 376 | 120.85 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 384 | 120.89 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 396 | 120.93 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 403 | 120.94 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 411 | 120.95 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 427 | 120.98 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 447 | 121.02 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 449 | 121.03 | wind | 7.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 454 | 121.04 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 457 | 121.04 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 460 | 121.05 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 482 | 121.10 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 511 | 121.15 | wind | 7.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 515 | 121.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 555 | 121.24 | humidity | 90.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 623 | 121.35 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 649 | 121.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 652 | 121.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 656 | 121.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 667 | 121.42 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 710 | 121.51 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 728 | 121.56 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 776 | 121.67 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 848 | 121.77 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 909 | 121.90 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 925 | 121.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 973 | 122.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 993 | 122.05 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 23 |