Os03g0182600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S2 family protein.
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Os03g0182600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.56 | 0.416 | 13.9 | 1.56 | 1.14 | 0.704 | 1.03 | 1.36 | 0.433 | 19.5 | 39.5 | 74 | -- | -- |
| 81.4 | 0.42 | 13.9 | 1.56 | 1.12 | 0.564 | 0.82 | -- | 0.439 | 19.4 | 37.63 | 70 | -- | -- |
| 81.22 | 0.42 | 13.9 | 1.54 | 1.14 | 0.67 | -- | 1.05 | 0.44 | 19.4 | 39.49 | 70 | -- | -- |
| 83.05 | 0.424 | 13.9 | 1.55 | 1.14 | 0.637 | -- | -- | 0.444 | 19.3 | 40.02 | 70 | -- | -- |
| 115.01 | 0.499 | 13.9 | 1.39 | -- | 0.881 | -- | 0.672 | 0.295 | -- | 40.2 | 797 | -- | -- |
| 87.95 | 0.44 | 13.9 | 1.54 | 1.11 | -- | 0.787 | -- | 0.465 | 18.8 | -- | -- | -- | -- |
| 89.51 | 0.443 | 13.9 | 1.53 | 1.12 | -- | -- | -- | 0.468 | 18.7 | -- | -- | -- | -- |
| 105.37 | 0.478 | 13.8 | 1.27 | -- | 1.04 | -- | -- | 0.374 | -- | 10.01 | 831 | -- | -- |
| 144.13 | 0.562 | 13.9 | -- | 1.12 | 0.475 | -- | -- | 0.304 | 19.3 | 40.02 | 70 | -- | -- |
| 154.68 | 0.581 | 13.9 | 1.51 | -- | -- | -- | -- | 0.445 | -- | -- | -- | -- | -- |
| 151.29 | 0.575 | 13.9 | -- | 1.1 | -- | -- | -- | 0.297 | 18.8 | -- | -- | -- | -- |
| 152.11 | 0.574 | 13.9 | -- | -- | 1.27 | -- | -- | 0.35 | -- | 10.03 | 774 | -- | -- |
| 214.46 | 0.684 | 13.9 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 4 | 71.39 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 7 | 71.59 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 22 | 72.09 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 24 | 72.12 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 99 | 73.93 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 122 | 74.25 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 136 | 74.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 169 | 74.83 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 190 | 75.10 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 219 | 75.30 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 14 |
| 224 | 75.35 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 255 | 75.41 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 279 | 75.57 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 298 | 75.75 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 302 | 75.80 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 305 | 75.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 310 | 75.84 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 320 | 75.90 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 330 | 75.95 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 333 | 75.97 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 369 | 76.05 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 387 | 76.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 388 | 76.17 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 419 | 76.24 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 463 | 76.39 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 473 | 76.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 481 | 76.48 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 487 | 76.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 507 | 76.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 508 | 76.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 510 | 76.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 513 | 76.55 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 515 | 76.56 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 518 | 76.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 3 |
| 519 | 76.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 538 | 76.65 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 540 | 76.65 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 21 |
| 543 | 76.65 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 550 | 76.68 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 552 | 76.68 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 553 | 76.68 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 555 | 76.68 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 556 | 76.68 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 557 | 76.68 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 558 | 76.68 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 571 | 76.71 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 575 | 76.73 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 577 | 76.73 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 578 | 76.73 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 579 | 76.73 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 580 | 76.73 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 582 | 76.73 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 587 | 76.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 588 | 76.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 610 | 76.81 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 611 | 76.81 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 626 | 76.83 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 627 | 76.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 630 | 76.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 631 | 76.83 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 632 | 76.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 636 | 76.84 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 640 | 76.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 644 | 76.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 670 | 76.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 675 | 76.88 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 677 | 76.88 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 678 | 76.88 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 680 | 76.88 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 681 | 76.88 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 682 | 76.88 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 708 | 76.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 711 | 76.93 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 718 | 76.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 720 | 76.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 721 | 76.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 723 | 76.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 724 | 76.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 727 | 76.95 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 728 | 76.95 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 734 | 76.96 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 738 | 76.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 18 |
| 739 | 76.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 746 | 77.00 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 754 | 77.02 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 757 | 77.02 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 815 | 77.13 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 817 | 77.13 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 818 | 77.13 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 823 | 77.15 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 852 | 77.21 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 862 | 77.23 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 865 | 77.24 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 892 | 77.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 894 | 77.26 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 909 | 77.27 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 910 | 77.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 916 | 77.28 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 940 | 77.33 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 946 | 77.33 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 961 | 77.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 967 | 77.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 989 | 77.39 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 993 | 77.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |