Os03g0181500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fiddlehead protein.
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Os03g0181500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fiddlehead protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.01 | 0.472 | 13 | -2.66 | 1.06 | 1.36 | -0.192 | -2.35 | -0.123 | 3.07 | 17.24 | 1320 | -- | -- |
| 105.62 | 0.479 | 13 | -2.08 | 1.08 | 1.47 | -0.364 | -- | 0.0393 | 3.01 | 14.7 | 1368 | -- | -- |
| 101.12 | 0.468 | 13 | -2.66 | 1.06 | 1.36 | -- | -2.4 | -0.127 | 3.06 | 17.36 | 1310 | -- | -- |
| 106.08 | 0.48 | 13 | -2.08 | 1.08 | 1.48 | -- | -- | 0.0421 | 2.98 | 14.43 | 1375 | -- | -- |
| 158.42 | 0.586 | 13 | -2.61 | -- | 1.72 | -- | -2.13 | -0.127 | -- | 17.22 | 1140 | -- | -- |
| 143.11 | 0.561 | 12.9 | -1.62 | 1.19 | -- | -0.307 | -- | 0.306 | 2.97 | -- | -- | -- | -- |
| 143.42 | 0.561 | 12.9 | -1.61 | 1.18 | -- | -- | -- | 0.308 | 2.94 | -- | -- | -- | -- |
| 162.81 | 0.594 | 13 | -2.11 | -- | 1.89 | -- | -- | 0.00223 | -- | 14.6 | 1140 | -- | -- |
| 204.38 | 0.666 | 12.9 | -- | 1.09 | 0.628 | -- | -- | 0.397 | 3.01 | 10.11 | 1242 | -- | -- |
| 224.2 | 0.7 | 12.9 | -1.56 | -- | -- | -- | -- | 0.338 | -- | -- | -- | -- | -- |
| 211.77 | 0.681 | 12.9 | -- | 1.15 | -- | -- | -- | 0.487 | 2.93 | -- | -- | -- | -- |
| 267 | 0.761 | 12.9 | -- | -- | 0.918 | -- | -- | 0.361 | -- | 17.4 | 1111 | -- | -- |
| 288.38 | 0.793 | 12.9 | -- | -- | -- | -- | -- | 0.511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.94 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 14 | 99.82 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 21 | 99.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 38 | 100.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 46 | 100.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 50 | 100.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 52 | 100.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 80 | 100.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 86 | 100.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 119 | 100.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 126 | 100.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 163 | 100.57 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 260 | 100.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 614 | 101.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 634 | 101.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 663 | 101.65 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 672 | 101.66 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 688 | 101.69 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 748 | 101.80 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 781 | 101.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 835 | 101.93 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 16 |
| 836 | 101.93 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 18 |
| 899 | 102.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |