Os03g0180400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1).
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Os03g0180400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.17 | 0.206 | 13.2 | -0.00268 | 0.537 | -0.116 | -0.0555 | -1.74 | 0.0188 | 20.1 | 18.99 | 741 | -- | -- |
| 20.92 | 0.213 | 13.2 | 0.394 | 0.497 | -0.197 | -0.556 | -- | 0.156 | 20 | 24.15 | 1644 | -- | -- |
| 19.17 | 0.204 | 13.2 | -0.000477 | 0.536 | -0.118 | -- | -1.76 | 0.0174 | 20.1 | 18.8 | 717 | -- | -- |
| 21.15 | 0.214 | 13.2 | 0.394 | 0.492 | -0.225 | -- | -- | 0.0577 | 20.3 | 29.91 | 1622 | -- | -- |
| 33.07 | 0.268 | 13.2 | -0.08 | -- | -0.1 | -- | -1.7 | -0.0262 | -- | 17.25 | 3064 | -- | -- |
| 22.04 | 0.22 | 13.2 | 0.316 | 0.488 | -- | -0.507 | -- | 0.0901 | 20.1 | -- | -- | -- | -- |
| 22.81 | 0.224 | 13.2 | 0.331 | 0.488 | -- | -- | -- | 0.0897 | 20.1 | -- | -- | -- | -- |
| 33.55 | 0.27 | 13.2 | 0.401 | -- | -0.195 | -- | -- | 0.0498 | -- | 30.3 | 5786 | -- | -- |
| 24.82 | 0.232 | 13.2 | -- | 0.493 | -0.166 | -- | -- | 0.0239 | 20.2 | 30.6 | 1662 | -- | -- |
| 35.88 | 0.28 | 13.2 | 0.326 | -- | -- | -- | -- | 0.0837 | -- | -- | -- | -- | -- |
| 25.69 | 0.237 | 13.2 | -- | 0.486 | -- | -- | -- | 0.0529 | 20.1 | -- | -- | -- | -- |
| 37.25 | 0.284 | 13.2 | -- | -- | -0.15 | -- | -- | 0.0763 | -- | 31.3 | 7176 | -- | -- |
| 38.69 | 0.29 | 13.2 | -- | -- | -- | -- | -- | 0.0475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 4 | 18.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 6 | 18.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 8 | 18.30 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 12 | 18.35 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 14 | 18.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 18 | 18.39 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 26 | 18.45 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 36 | 18.49 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 39 | 18.50 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 57 | 18.53 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 59 | 18.53 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 69 | 18.55 | wind | 9.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 79 | 18.56 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 87 | 18.57 | wind | 9.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 92 | 18.57 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 96 | 18.58 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 107 | 18.58 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 134 | 18.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 142 | 18.62 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 158 | 18.63 | wind | 7.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 159 | 18.63 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 191 | 18.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 203 | 18.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 208 | 18.67 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 305 | 18.76 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 382 | 18.82 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 526 | 18.91 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 538 | 18.92 | temperature | 25.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 571 | 18.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 652 | 18.98 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 688 | 19.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 714 | 19.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 724 | 19.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 867 | 19.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 910 | 19.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 976 | 19.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |