Os03g0180300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ataxin-2, C-terminal domain containing protein.
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Os03g0180300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ataxin-2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.62 | 0.307 | 12.3 | -0.911 | 1.74 | -0.57 | -0.105 | 0.0199 | 0.0558 | 7.96 | 20.4 | 634 | -- | -- |
| 42.55 | 0.304 | 12.3 | -0.918 | 1.74 | -0.563 | -0.11 | -- | 0.0538 | 7.97 | 20.5 | 608 | -- | -- |
| 42.57 | 0.304 | 12.3 | -0.911 | 1.75 | -0.553 | -- | 0.078 | 0.0545 | 7.98 | 20.51 | 585 | -- | -- |
| 42.58 | 0.304 | 12.3 | -0.925 | 1.74 | -0.561 | -- | -- | 0.0546 | 7.98 | 20.57 | 589 | -- | -- |
| 156.37 | 0.582 | 12.3 | -0.74 | -- | -1.2 | -- | 0.135 | 0.387 | -- | 25.7 | 552 | -- | -- |
| 52.11 | 0.338 | 12.4 | -1.12 | 1.82 | -- | -0.0787 | -- | -0.0682 | 8.01 | -- | -- | -- | -- |
| 52.13 | 0.338 | 12.4 | -1.12 | 1.82 | -- | -- | -- | -0.0681 | 8 | -- | -- | -- | -- |
| 156.51 | 0.583 | 12.3 | -0.753 | -- | -1.21 | -- | -- | 0.39 | -- | 25.7 | 561 | -- | -- |
| 50.83 | 0.332 | 12.3 | -- | 1.82 | -0.987 | -- | -- | 0.266 | 7.98 | 17.66 | 47520 | -- | -- |
| 232.96 | 0.713 | 12.4 | -1.1 | -- | -- | -- | -- | -0.045 | -- | -- | -- | -- | -- |
| 85.29 | 0.432 | 12.3 | -- | 1.81 | -- | -- | -- | 0.0568 | 8.05 | -- | -- | -- | -- |
| 169.5 | 0.606 | 12.3 | -- | -- | -1.33 | -- | -- | 0.542 | -- | 25.21 | 570 | -- | -- |
| 265.11 | 0.76 | 12.4 | -- | -- | -- | -- | -- | 0.0775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.06 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 5 |
| 7 | 41.03 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 20 |
| 10 | 41.26 | temperature | 10 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 11 | 41.34 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 11 |
| 15 | 41.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 16 | 41.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 28 | 41.77 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 13 |
| 32 | 41.89 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 19 |
| 40 | 42.08 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 15 |
| 45 | 42.13 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 48 | 42.15 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 8 |
| 75 | 42.33 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 76 | 42.33 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 4 |
| 88 | 42.39 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 14 |
| 193 | 42.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 234 | 42.90 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 14 |
| 239 | 42.93 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 247 | 42.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 252 | 42.95 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 21 |
| 331 | 43.13 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 360 | 43.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 5 |
| 531 | 43.51 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 538 | 43.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 542 | 43.53 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 22 |
| 573 | 43.58 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 593 | 43.62 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 692 | 43.76 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 23 |
| 716 | 43.80 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |