Os03g0178100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os03g0178100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.82 | 0.462 | 10.1 | -0.838 | 3.86 | -1.66 | 2.15 | 11.6 | -0.577 | 6.75 | 27.58 | 533 | -- | -- |
| 110.49 | 0.493 | 10.3 | -2.05 | 4.17 | 0.498 | 1.62 | -- | -0.757 | 6.69 | 34.03 | 854 | -- | -- |
| 106.34 | 0.48 | 10.2 | -0.905 | 3.89 | -1.88 | -- | 12 | -0.65 | 6.75 | 28.33 | 461 | -- | -- |
| 111.05 | 0.491 | 10.3 | -1.84 | 3.93 | -0.624 | -- | -- | -0.72 | 6.75 | 26.49 | 449 | -- | -- |
| 569.54 | 1.11 | 10.1 | 0.553 | -- | -4.84 | -- | 12.6 | 0.0881 | -- | 24.8 | 491 | -- | -- |
| 110.89 | 0.494 | 10.3 | -2.04 | 4.16 | -- | 1.6 | -- | -0.759 | 6.7 | -- | -- | -- | -- |
| 117.4 | 0.507 | 10.3 | -2.02 | 4.17 | -- | -- | -- | -0.764 | 6.69 | -- | -- | -- | -- |
| 609.87 | 1.15 | 10.3 | -1.27 | -- | -3.8 | -- | -- | -0.343 | -- | 24.6 | 460 | -- | -- |
| 193.73 | 0.648 | 10.2 | -- | 3.72 | -1.58 | -- | -- | -0.346 | 6.77 | 9.676 | 447 | -- | -- |
| 1024.96 | 1.5 | 10.4 | -1.92 | -- | -- | -- | -- | -0.681 | -- | -- | -- | -- | -- |
| 224.81 | 0.701 | 10.2 | -- | 4.15 | -- | -- | -- | -0.539 | 6.72 | -- | -- | -- | -- |
| 650.5 | 1.19 | 10.3 | -- | -- | -3.98 | -- | -- | -0.187 | -- | 24.5 | 480 | -- | -- |
| 1122.39 | 1.56 | 10.3 | -- | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.61 | temperature | 25.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 3 | 86.78 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 16 | 87.75 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 17 | 87.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 13 |
| 18 | 87.98 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 14 | 13 |
| 19 | 88.03 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 20 | 88.05 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 26 | 88.18 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 54 | 88.60 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 3 |
| 56 | 88.66 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 58 | 88.74 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 64 | 88.94 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 82 | 89.50 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 85 | 89.57 | wind | 1.0 | 10 | > th | dose dependent | rect. | 16 | 3 |
| 104 | 89.71 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 127 | 89.94 | radiation | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 128 | 89.95 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 130 | 89.97 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 196 | 90.38 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 16 | 16 |
| 230 | 90.54 | humidity | 80.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 232 | 90.55 | radiation | 10.0 | 270 | > th | dose independent | sin | 15 | NA |
| 244 | 90.75 | wind | 3.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 284 | 90.97 | humidity | 80.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 303 | 91.16 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 304 | 91.17 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 305 | 91.18 | radiation | 1.0 | 270 | < th | dose independent | sin | 20 | NA |
| 306 | 91.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 307 | 91.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 312 | 91.24 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 6 |
| 316 | 91.26 | wind | 1.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 317 | 91.27 | radiation | 1.0 | 270 | > th | dose independent | sin | 20 | NA |
| 318 | 91.28 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 320 | 91.28 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 322 | 91.28 | temperature | 10.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 327 | 91.30 | wind | 3.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 350 | 91.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 352 | 91.35 | wind | 1.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 354 | 91.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 4 |
| 355 | 91.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 4 |
| 375 | 91.40 | radiation | 1.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 381 | 91.42 | radiation | 40.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 384 | 91.45 | radiation | 1.0 | 90 | < th | dose independent | sin | 16 | NA |
| 387 | 91.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 3 |
| 388 | 91.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 404 | 91.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 405 | 91.60 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 412 | 91.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 11 |
| 413 | 91.64 | radiation | 20.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 414 | 91.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 417 | 91.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 419 | 91.68 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 423 | 91.70 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 425 | 91.70 | wind | 1.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 450 | 91.77 | radiation | 1.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 469 | 91.85 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 471 | 91.85 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 473 | 91.85 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 475 | 91.85 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 478 | 91.86 | wind | 1.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 500 | 91.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 501 | 91.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 506 | 91.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 6 |
| 507 | 91.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 21 |
| 508 | 91.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 21 |
| 519 | 91.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 531 | 92.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 1 |
| 532 | 92.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 533 | 92.05 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 536 | 92.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 537 | 92.08 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 548 | 92.14 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 556 | 92.23 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 13 |
| 563 | 92.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 566 | 92.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 573 | 92.29 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 582 | 92.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 588 | 92.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 1 |
| 589 | 92.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 590 | 92.39 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 5 |
| 593 | 92.41 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 5 |
| 626 | 92.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 628 | 92.49 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 630 | 92.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 23 |
| 652 | 92.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 675 | 92.66 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 682 | 92.69 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 16 | 2 |
| 714 | 92.76 | wind | 3.0 | 10 | > th | dose independent | rect. | 16 | 3 |
| 717 | 92.77 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 5 |
| 719 | 92.77 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 5 |
| 723 | 92.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 5 |
| 726 | 92.79 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 5 |
| 728 | 92.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 729 | 92.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 748 | 92.82 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 5 |
| 766 | 92.88 | humidity | 80.0 | 10 | < th | dose independent | rect. | 16 | 3 |
| 768 | 92.89 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 5 |
| 792 | 92.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 859 | 93.08 | wind | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 862 | 93.09 | humidity | 50.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 865 | 93.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 6 |
| 894 | 93.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 11 |
| 895 | 93.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 11 |
| 896 | 93.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 897 | 93.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 13 |
| 919 | 93.25 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 19 | 19 |
| 923 | 93.25 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 19 | 19 |
| 932 | 93.29 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 954 | 93.36 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 958 | 93.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 964 | 93.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 965 | 93.40 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 3 |
| 966 | 93.40 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 3 |