Os03g0176500 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0176500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.92	(0.0379)	R²	:	0.377
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	1.39	(0.0941)	R²_dC	:	0.3	R²_C	:	0.287
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.567	(0.0798)	R²_dN8	:	0.0893	R²_N8	:	0.0763
σ	:	0.715
deviance	:	233.71
__

_____

C
peak time of C	:	14.8
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
205.39	0.673	3.81	-0.0609	1.37	-3.64	0.0209	9.75	-0.728	14.9	-2.584e-05	1860	--	--
221.52	0.699	3.94	-0.662	1.38	-0.58	-0.00621	--	-0.644	14.8	-0.1823	105	--	--
205.35	0.667	3.8	-0.03	1.38	-3.74	--	10.2	-0.723	14.9	0.1187	1859	--	--
220.05	0.691	3.94	-0.615	1.37	-0.911	--	--	-0.635	14.9	-0.05096	144	--	--
311.92	0.823	3.78	0.04	--	-3.94	--	10.6	-0.768	--	0.1995	2104	--	--
221.89	0.698	3.94	-0.67	1.38	--	0.0156	--	-0.642	14.8	--	--	--	--
221.89	0.698	3.94	-0.67	1.38	--	--	--	-0.642	14.8	--	--	--	--
318.16	0.831	3.95	-0.506	--	-0.964	--	--	-0.729	--	0.4007	2135	--	--
215.72	0.684	3.95	--	1.39	-0.96	--	--	-0.675	14.9	-0.5557	2219	--	--
332.19	0.852	3.94	-0.729	--	--	--	--	-0.677	--	--	--	--	--
233.71	0.715	3.92	--	1.39	--	--	--	-0.567	14.8	--	--	--	--
317.08	0.829	3.94	--	--	-0.935	--	--	-0.696	--	1.039	2522	--	--
346.19	0.868	3.93	--	--	--	--	--	-0.597	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	202.20	humidity	70.0	270	> th	dose independent	rect.	15	17
2	202.34	wind	5.0	90	< th	dose independent	rect.	24	17
4	202.75	wind	5.0	270	< th	dose independent	rect.	22	17
9	203.20	wind	9.0	90	< th	dose dependent	rect.	24	17
10	203.21	wind	9.0	270	< th	dose dependent	rect.	22	16
13	203.56	wind	3.0	90	> th	dose dependent	rect.	17	20
25	204.09	wind	7.0	10	< th	dose dependent	rect.	24	16
29	204.17	temperature	10.0	30	> th	dose dependent	rect.	8	23
30	204.19	temperature	30.0	270	< th	dose independent	rect.	16	16
39	204.67	temperature	30.0	30	< th	dose dependent	rect.	17	20
41	204.75	atmosphere	1015.0	270	< th	dose dependent	rect.	8	9
52	204.95	temperature	30.0	270	< th	dose independent	rect.	12	22
57	205.02	wind	3.0	10	< th	dose independent	rect.	24	16
76	205.19	temperature	15.0	1440	> th	dose independent	rect.	8	3
77	205.20	atmosphere	1005.0	270	> th	dose independent	rect.	5	16
79	205.24	wind	9.0	30	< th	dose dependent	rect.	8	23
84	205.34	temperature	15.0	1440	> th	dose independent	rect.	6	5
85	205.34	humidity	70.0	30	> th	dose independent	rect.	7	17
86	205.35	humidity	70.0	90	> th	dose independent	rect.	16	8
91	205.38	temperature	30.0	90	< th	dose dependent	rect.	5	18
98	205.48	wind	3.0	90	> th	dose dependent	rect.	20	17
102	205.53	wind	1.0	10	> th	dose dependent	rect.	5	8
105	205.61	humidity	70.0	10	> th	dose independent	rect.	16	8
108	205.65	wind	3.0	10	< th	dose independent	rect.	24	14
111	205.67	wind	9.0	90	> th	dose dependent	rect.	17	21
120	205.74	humidity	60.0	90	> th	dose dependent	rect.	7	16
125	205.77	humidity	90.0	10	< th	dose dependent	rect.	10	10
133	205.84	wind	3.0	90	> th	dose dependent	rect.	6	7
137	205.88	temperature	30.0	270	< th	dose independent	rect.	14	8
140	205.88	temperature	30.0	270	< th	dose dependent	rect.	3	18
159	205.99	humidity	60.0	270	> th	dose independent	rect.	14	8
176	206.09	wind	3.0	270	> th	dose dependent	rect.	6	3
192	206.17	humidity	50.0	270	> th	dose dependent	rect.	4	17
197	206.21	humidity	50.0	270	> th	dose independent	rect.	4	17
202	206.22	humidity	90.0	270	< th	dose independent	rect.	8	9
214	206.27	wind	1.0	90	> th	dose dependent	rect.	6	18
223	206.33	atmosphere	1015.0	10	< th	dose dependent	rect.	10	10
228	206.34	atmosphere	995.0	30	> th	dose dependent	rect.	7	15
236	206.37	temperature	30.0	10	< th	dose dependent	rect.	7	17
247	206.43	wind	3.0	1440	< th	dose dependent	rect.	3	1
249	206.44	precipitation	0.1	4320	< th	dose independent	rect.	11	7
252	206.44	precipitation	0.1	4320	< th	dose dependent	rect.	11	7
254	206.44	wind	1.0	10	> th	dose dependent	rect.	20	17
277	206.52	wind	9.0	90	> th	dose independent	rect.	17	21
279	206.52	temperature	20.0	270	< th	dose dependent	rect.	4	18
284	206.54	wind	1.0	1440	> th	dose independent	rect.	1	4
287	206.55	wind	9.0	1440	> th	dose independent	rect.	10	1
304	206.65	precipitation	0.1	4320	> th	dose dependent	rect.	11	8
306	206.66	precipitation	0.1	4320	> th	dose independent	rect.	11	7
310	206.68	temperature	15.0	1440	> th	dose independent	rect.	8	15
314	206.69	wind	9.0	1440	< th	dose independent	rect.	2	10
315	206.69	humidity	50.0	270	> th	dose independent	rect.	14	23
328	206.75	humidity	90.0	270	> th	dose dependent	rect.	6	13
333	206.77	humidity	70.0	30	< th	dose independent	sin	17	NA
334	206.77	wind	5.0	90	> th	dose independent	rect.	17	20
367	206.88	wind	9.0	1440	< th	dose independent	rect.	10	1
375	206.90	precipitation	0.1	43200	< th	dose independent	rect.	17	1
377	206.90	precipitation	0.1	43200	< th	dose dependent	rect.	17	1
380	206.90	temperature	15.0	270	> th	dose dependent	rect.	21	20
392	206.94	precipitation	0.1	1440	> th	dose dependent	rect.	21	21
393	206.95	wind	9.0	1440	< th	dose independent	rect.	6	6
396	206.95	temperature	30.0	270	< th	dose dependent	rect.	3	7
404	206.97	humidity	70.0	90	> th	dose independent	rect.	12	11
409	206.98	wind	9.0	1440	> th	dose independent	rect.	9	3
433	207.02	wind	9.0	1440	< th	dose independent	rect.	9	3
437	207.03	precipitation	0.1	43200	> th	dose independent	rect.	17	1
438	207.03	humidity	70.0	30	> th	dose independent	rect.	7	15
439	207.03	atmosphere	1005.0	10	> th	dose independent	rect.	7	16
440	207.03	temperature	30.0	270	< th	dose independent	rect.	4	17
443	207.04	humidity	70.0	30	> th	dose independent	sin	18	NA
444	207.04	atmosphere	1005.0	10	< th	dose independent	rect.	9	9
450	207.05	wind	7.0	10	< th	dose dependent	rect.	24	12
464	207.10	precipitation	0.1	4320	> th	dose dependent	rect.	8	11
468	207.11	wind	9.0	1440	> th	dose dependent	rect.	10	2
473	207.12	wind	3.0	90	> th	dose dependent	sin	6	NA
478	207.13	precipitation	0.1	1440	< th	dose independent	rect.	1	17
481	207.13	precipitation	0.1	1440	< th	dose dependent	rect.	1	17
490	207.16	wind	5.0	90	> th	dose independent	rect.	6	7
491	207.16	precipitation	0.1	1440	< th	dose independent	rect.	22	20
495	207.16	precipitation	0.1	1440	< th	dose dependent	rect.	22	20
504	207.18	precipitation	0.1	4320	> th	dose independent	rect.	16	2
512	207.19	humidity	90.0	270	> th	dose independent	rect.	5	15
523	207.21	precipitation	0.1	720	> th	dose independent	rect.	20	22
540	207.23	wind	5.0	90	> th	dose independent	rect.	21	16
542	207.24	precipitation	0.1	43200	> th	dose dependent	rect.	17	1
560	207.26	temperature	15.0	30	> th	dose dependent	rect.	10	21
574	207.30	humidity	90.0	720	> th	dose dependent	rect.	7	9
591	207.33	atmosphere	995.0	270	> th	dose dependent	rect.	5	16
599	207.36	temperature	15.0	1440	> th	dose independent	rect.	6	17
610	207.38	temperature	30.0	90	< th	dose independent	rect.	16	21
622	207.41	wind	1.0	1440	< th	dose independent	rect.	1	4
638	207.45	wind	9.0	270	< th	dose dependent	rect.	8	9
647	207.47	humidity	70.0	30	> th	dose independent	rect.	5	19
649	207.47	precipitation	0.1	4320	> th	dose dependent	rect.	16	2
666	207.48	precipitation	0.1	1440	> th	dose independent	rect.	22	20
696	207.53	wind	9.0	90	< th	dose dependent	rect.	21	23
746	207.62	humidity	70.0	30	< th	dose independent	rect.	10	10
768	207.64	wind	3.0	10	< th	dose independent	rect.	22	19
775	207.65	wind	1.0	10	> th	dose dependent	sin	5	NA
799	207.70	precipitation	0.1	4320	< th	dose independent	rect.	16	2
800	207.70	wind	7.0	270	< th	dose independent	rect.	8	9
802	207.70	precipitation	0.1	4320	< th	dose dependent	rect.	16	2
815	207.73	humidity	70.0	30	> th	dose independent	rect.	9	15
822	207.73	temperature	10.0	270	> th	dose dependent	rect.	8	21
824	207.74	wind	9.0	10	< th	dose dependent	sin	5	NA
847	207.77	wind	3.0	270	> th	dose independent	rect.	6	3
898	207.84	humidity	70.0	10	> th	dose independent	rect.	14	10
905	207.85	temperature	10.0	90	> th	dose dependent	rect.	21	23
937	207.91	wind	1.0	1440	> th	dose dependent	rect.	3	1
938	207.91	temperature	15.0	10	> th	dose dependent	rect.	10	10
977	207.97	wind	9.0	90	> th	dose dependent	rect.	21	17