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Os03g0175200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0248) R2 : 0.717
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.52 (0.0788) R2dC : 1.14 R2C : -0.224
β3 : 2.8 (0.0974) R2dE : 0.936 R2E : -0.424
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0482 (0.0525) R2dN8 : 0.000756 R2N8 : 0.00191
σ : 0.463
deviance : 98.81
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C
peak time of C : 23.4
E
wheather : temperature
threshold : 8.867
memory length : 368
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.43
open length of G : 7.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.75 0.417 11.6 -0.0976 2.2 2.37 -2.83 -2.83 0.0307 23.4 9.15 300 1.57 7.8
86.94 0.434 11.5 0.118 2.27 2.37 -1.73 -- 0.0869 23.5 7.854 312 1.55 7.82
98.27 0.462 11.5 0.254 2.41 2.54 -- 0.328 0.0879 23.6 8.623 352 1.47 7.81
98.17 0.461 11.5 0.23 2.45 2.6 -- -- 0.0947 23.5 8.598 353 1.48 7.82
222.89 0.695 11.5 0.242 -- 1.29 -- -1.54 0.184 -- 1.023 19 1.36 8.4
129.53 0.534 11.4 0.315 1.86 -- -2.13 -- 0.272 3.2 -- -- -- --
144.1 0.562 11.4 0.358 1.85 -- -- -- 0.284 3.31 -- -- -- --
227.83 0.703 11.5 0.343 -- 1.29 -- -- 0.198 -- -1.435 24 1.33 8.38
98.81 0.463 11.6 -- 2.52 2.8 -- -- 0.0482 23.4 8.867 368 1.43 7.7
338.03 0.859 11.4 0.437 -- -- -- -- 0.333 -- -- -- -- --
147.48 0.568 11.4 -- 1.86 -- -- -- 0.244 3.31 -- -- -- --
230.46 0.707 11.5 -- -- 1.29 -- -- 0.152 -- -4.455 26 1.63 8.03
343.06 0.865 11.4 -- -- -- -- -- 0.285 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.08 temperature 10.0 270 > th dose dependent rect. 2 8
6 85.61 radiation 30.0 270 < th dose independent rect. 15 18
17 88.49 radiation 40.0 270 < th dose dependent rect. 15 18
19 88.84 radiation 40.0 90 < th dose dependent rect. 15 20
23 89.02 humidity 60.0 90 > th dose independent rect. 16 19
32 90.15 temperature 20.0 720 < th dose independent rect. 3 4
33 90.15 radiation 40.0 270 < th dose independent rect. 3 17
34 90.33 temperature 10.0 270 > th dose independent rect. 8 7
35 90.33 atmosphere 1015.0 270 < th dose independent rect. 8 7
36 90.33 temperature 10.0 270 > th dose independent rect. 15 17
40 90.50 temperature 25.0 720 < th dose dependent rect. 3 3
41 90.56 precipitation 0.1 270 < th dose independent rect. 8 7
42 90.56 precipitation 0.1 270 < th dose dependent rect. 8 7
43 90.67 wind 9.0 270 < th dose independent rect. 15 17
48 90.87 atmosphere 995.0 270 > th dose independent rect. 8 7
51 91.02 radiation 10.0 10 < th dose dependent sin 20 NA
54 91.12 precipitation 0.1 270 < th dose independent rect. 15 17
55 91.12 precipitation 0.1 270 < th dose dependent rect. 15 17
58 91.23 wind 1.0 270 > th dose independent rect. 8 7
60 91.28 radiation 30.0 270 < th dose independent rect. 2 8
77 91.79 atmosphere 995.0 270 > th dose independent rect. 15 17
81 91.95 radiation 40.0 10 < th dose independent rect. 16 19
86 92.06 temperature 20.0 270 > th dose independent rect. 3 6
90 92.12 radiation 40.0 270 < th dose independent rect. 14 6
92 92.14 wind 9.0 270 < th dose independent rect. 8 7
95 92.19 humidity 50.0 270 > th dose independent rect. 15 17
101 92.33 radiation 40.0 90 < th dose dependent rect. 5 15
103 92.37 radiation 20.0 90 < th dose dependent rect. 6 14
105 92.41 humidity 50.0 270 > th dose independent rect. 8 7
113 92.50 humidity 60.0 270 > th dose independent rect. 1 9
114 92.65 radiation 40.0 270 < th dose dependent rect. 3 16
116 92.67 wind 1.0 270 > th dose independent rect. 14 7
117 92.69 temperature 10.0 270 > th dose independent rect. 14 7
118 92.69 temperature 10.0 270 > th dose independent rect. 21 17
119 92.69 atmosphere 995.0 270 > th dose independent rect. 21 17
127 92.76 precipitation 0.1 270 < th dose independent rect. 21 17
128 92.76 precipitation 0.1 270 < th dose dependent rect. 21 17
130 92.81 atmosphere 1015.0 270 < th dose independent rect. 14 7
143 93.00 precipitation 0.1 270 < th dose independent rect. 14 7
144 93.00 precipitation 0.1 270 < th dose dependent rect. 14 7
145 93.04 wind 9.0 270 < th dose independent rect. 14 7
151 93.10 radiation 20.0 90 < th dose dependent sin 21 NA
199 93.56 humidity 50.0 270 > th dose independent rect. 14 6
209 93.71 humidity 50.0 270 > th dose independent rect. 20 18
210 93.72 radiation 40.0 10 < th dose dependent rect. 16 19
213 93.76 humidity 60.0 90 > th dose independent rect. 5 15
230 93.90 atmosphere 995.0 270 > th dose independent rect. 14 6
254 94.13 radiation 1.0 270 > th dose independent rect. 9 6
269 94.28 temperature 25.0 270 < th dose independent rect. 9 4
285 94.35 atmosphere 1010.0 270 < th dose independent rect. 2 8
306 94.51 temperature 15.0 270 > th dose independent rect. 1 9
336 94.72 wind 9.0 270 < th dose independent rect. 21 17
409 95.32 temperature 10.0 270 > th dose dependent rect. 3 17
411 95.33 radiation 1.0 90 > th dose dependent rect. 11 7
414 95.35 wind 7.0 270 < th dose independent rect. 1 9
422 95.40 radiation 10.0 270 > th dose independent rect. 11 1
450 95.54 atmosphere 1015.0 270 < th dose independent rect. 15 17
461 95.64 temperature 15.0 270 > th dose independent rect. 3 17
463 95.65 temperature 15.0 270 > th dose independent rect. 4 15
464 95.65 radiation 1.0 30 > th dose dependent sin 18 NA
466 95.66 radiation 10.0 10 < th dose dependent rect. 14 6
469 95.68 radiation 1.0 270 > th dose dependent rect. 11 1
476 95.72 radiation 1.0 90 > th dose independent rect. 11 5
555 96.17 radiation 10.0 90 < th dose independent sin 21 NA
559 96.18 temperature 10.0 1440 > th dose independent rect. 12 5
564 96.18 temperature 10.0 1440 > th dose independent rect. 17 19
574 96.22 radiation 40.0 270 < th dose dependent rect. 3 7
579 96.25 radiation 40.0 270 < th dose dependent rect. 15 4
585 96.28 temperature 30.0 10 < th dose independent rect. 16 19
591 96.31 atmosphere 995.0 270 > th dose independent rect. 1 9
593 96.31 temperature 10.0 270 > th dose independent rect. 10 15
611 96.43 radiation 10.0 90 < th dose dependent rect. 9 11
629 96.57 wind 1.0 270 > th dose independent rect. 15 17
631 96.58 wind 1.0 30 > th dose independent rect. 16 19
671 96.77 wind 9.0 30 < th dose independent rect. 16 19
673 96.77 radiation 40.0 270 < th dose dependent rect. 14 6
679 96.80 atmosphere 995.0 30 > th dose independent rect. 16 19
685 96.83 precipitation 0.1 270 < th dose independent rect. 1 9
687 96.83 precipitation 0.1 270 < th dose dependent rect. 1 9
699 96.89 temperature 10.0 30 > th dose independent rect. 11 5
701 96.89 atmosphere 1015.0 30 < th dose independent rect. 11 5
703 96.89 temperature 10.0 30 > th dose independent rect. 16 19
707 96.90 precipitation 0.1 30 < th dose independent rect. 11 5
709 96.90 precipitation 0.1 30 < th dose dependent rect. 11 5
712 96.92 temperature 30.0 270 < th dose independent rect. 2 7
721 96.98 precipitation 0.1 270 < th dose independent rect. 10 15
722 96.98 precipitation 0.1 30 < th dose independent rect. 16 19
725 96.98 precipitation 0.1 270 < th dose dependent rect. 10 15
726 96.98 precipitation 0.1 30 < th dose dependent rect. 16 19
738 97.04 temperature 30.0 30 < th dose independent rect. 11 5
739 97.04 humidity 50.0 270 > th dose dependent rect. 2 8
769 97.18 radiation 1.0 10 > th dose independent rect. 11 7
770 97.18 atmosphere 1010.0 270 < th dose independent rect. 3 17
794 97.28 wind 1.0 30 > th dose independent rect. 11 5
821 97.39 wind 9.0 270 < th dose independent rect. 3 17
911 97.67 radiation 1.0 90 > th dose dependent rect. 11 22
913 97.68 atmosphere 995.0 30 > th dose independent rect. 11 5
923 97.68 temperature 30.0 270 < th dose dependent rect. 8 6
994 97.94 temperature 10.0 270 > th dose independent rect. 20 7
995 97.94 temperature 30.0 270 < th dose independent rect. 20 7
996 97.94 humidity 50.0 270 > th dose independent rect. 20 7
999 97.94 atmosphere 995.0 270 > th dose independent rect. 20 7
1000 97.94 radiation 1.0 270 < th dose independent rect. 20 7