Os03g0172700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0172700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.99 | 0.21 | 2.89 | 0.0752 | 0.0999 | 0.363 | -0.0264 | -0.12 | -0.0331 | 8.72 | 2.336 | 2682 | -- | -- |
| 19.99 | 0.208 | 2.89 | 0.0791 | 0.1 | 0.37 | -0.0175 | -- | -0.0336 | 8.68 | 2.309 | 2686 | -- | -- |
| 19.99 | 0.208 | 2.89 | 0.0771 | 0.102 | 0.362 | -- | -0.143 | -0.0368 | 8.76 | 2.065 | 2684 | -- | -- |
| 19.99 | 0.208 | 2.89 | 0.079 | 0.1 | 0.385 | -- | -- | -0.0399 | 8.83 | 2.11 | 2684 | -- | -- |
| 20.54 | 0.211 | 2.89 | 0.0753 | -- | 0.359 | -- | -0.0288 | -0.0323 | -- | 2.392 | 2725 | -- | -- |
| 21.37 | 0.217 | 2.89 | -0.00966 | 0.0902 | -- | -0.069 | -- | -0.0241 | 7.55 | -- | -- | -- | -- |
| 21.37 | 0.216 | 2.89 | -0.0109 | 0.09 | -- | -- | -- | -0.0237 | 8.04 | -- | -- | -- | -- |
| 20.54 | 0.211 | 2.89 | 0.0746 | -- | 0.361 | -- | -- | -0.0324 | -- | 2.412 | 2732 | -- | -- |
| 20.13 | 0.209 | 2.89 | -- | 0.1 | 0.339 | -- | -- | -0.0416 | 8.74 | 2.27 | 2673 | -- | -- |
| 21.82 | 0.218 | 2.89 | -0.01 | -- | -- | -- | -- | -0.0226 | -- | -- | -- | -- | -- |
| 21.38 | 0.216 | 2.89 | -- | 0.0899 | -- | -- | -- | -0.0225 | 8.05 | -- | -- | -- | -- |
| 20.67 | 0.212 | 2.89 | -- | -- | 0.318 | -- | -- | -0.0368 | -- | 2.5 | 2725 | -- | -- |
| 21.82 | 0.218 | 2.89 | -- | -- | -- | -- | -- | -0.0215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.56 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 17.71 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 5 | 17.72 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 8 | 17.75 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 18.49 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 9 |
| 20 | 18.49 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 24 | 18.50 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 26 | 18.50 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 65 | 18.50 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 66 | 18.50 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 68 | 18.50 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 111 | 18.51 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 112 | 18.51 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 114 | 18.52 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 115 | 18.52 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 170 | 18.76 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 190 | 18.97 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 191 | 18.98 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 200 | 19.02 | wind | 5.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 291 | 19.39 | wind | 7.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 297 | 19.39 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 309 | 19.43 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 311 | 19.43 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 312 | 19.43 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 321 | 19.47 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 324 | 19.49 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 407 | 19.62 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 418 | 19.62 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 493 | 19.69 | wind | 7.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 517 | 19.70 | precipitation | 0.1 | 10 | > th | dose independent | sin | 0 | NA |
| 530 | 19.70 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 543 | 19.70 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 587 | 19.74 | wind | 7.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 646 | 19.78 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 676 | 19.80 | wind | 9.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 706 | 19.81 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 7 |
| 915 | 19.90 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 954 | 19.92 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 8 |
| 964 | 19.93 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 9 |